Lutra lutra (Eurasian river otter): 125096807
Help
Entry
125096807 CDS
T08100
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05016
Huntington disease
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
125096807
05022 Pathways of neurodegeneration - multiple diseases
125096807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125096807
Cilium and associated proteins [BR:
llv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
125096807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
DUF745
SpecificRecomb
COG3_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
125096807
NCBI-ProteinID:
XP_047579739
LinkDB
All DBs
Position
1:complement(56398319..56452322)
Genome browser
AA seq
429 aa
AA seq
DB search
MAAAAAVVTPSGLEDGVSRSRGEGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLHYEEEL
LRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPFEQPQEYDDPNATISNILS
ELRSLGRTTDFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPTYPVEELEEETIPE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAEWN
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
SSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATI
IPESAIGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgcggcagtggtcacgccgtcaggtttggaagatggagtgtctcgatcc
cgcggcgaaggggcaggggaggtggtcgtggagcgggggcccggcgcggcctaccacatg
ttcgtggtgatggaggacctggtggagaagctgaagctgctccactacgaggaggaactc
ctccggaagaacaacctgaagcccccgtccagacactattttgcactgcctaccaaccct
ggtgaacagttctacatgttttgcactcttgctgcttggctgattaacaaagcaggacgc
ccctttgagcaacctcaagaatatgatgaccctaatgcaactatatctaacatattatct
gagcttcgatcacttggcagaactacagattttcctccttcaaaattaaagtcaggttac
ggagaacatgtatgctatgttcttgactgtttagcagaagaagcattaaaatatattggt
ttcacctggaaaagaccaacatatccagtggaagaattagaagaagaaactatcccagaa
gatgatgcagaattaacattaaataaagtggatgaagaatttgtggaagaagaaacagac
aatgaagaaaactttattgatctcaatgtcttaaaggcccagacgtatcgtttggatatg
aacgagtctgccaaacaggaagatattttggaatccacaacagatgctgcagaatggaat
ctcgaagtggaacgtgtactaccacaactgaaagtcacgattaggactgacaataaggat
tggagaatccatgttgaccaaatgcaccaacacaaaagtggaatagaatctgctctaaag
gagaccaagggatttttggataaacttcataatgaaattagcaggactctggaaaagatc
agcagccgagaaaagtacatcaacaatcagcttgagcacttggttcaagaatatcgtgcg
gctcaagcccagctgagtgaggcgagggagcgataccagcagggtaacggtggagtaacg
gaaaggacccggctcctgtctgaggtgacagaagaactggaaaaggtaaagcaagaaatg
gaagaaaaaggcagcagcatgactgacggtgctcccttggtaaagattaaacagagctta
acaaagctgaagcaagaaacggttcagatggacatcagaattggcgttgtggaacacaca
ttactccaatcaaaactgaaggagaagtccaacatgactagggacatgcatgcaacaatc
attccagaatctgcaataggctcttattaa
DBGET
integrated database retrieval system
