Lutra lutra (Eurasian river otter): 125096833
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Entry
125096833 CDS
T08100
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04142
Lysosome
llv04722
Neurotrophin signaling pathway
llv04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125096833
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
125096833
09156 Nervous system
04722 Neurotrophin signaling pathway
125096833
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
125096833
NCBI-ProteinID:
XP_047579816
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Position
4:103496366..103560417
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AA seq
831 aa
AA seq
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MERPRGAADGLSRWPHGLGLLLLLQLLPPETFGQDRLDAPPPPAAPLSRWSGPVGVSWGL
RAAAPGGPVPRGGRWRRSALEEDQDCGRVRDFVAKLANNTHQHVFDDLSVSVSLSWVGDG
TGIILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSG
KVILTAEVSGGSHGGRIFRSSDFAKNFVQTNLPFHPLTQMMYSPQNSDYLLALSTENGLW
VSKDFGGKWEEIHKAVCLAKWGSENTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIG
VKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDM
VFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLS
EDNSIQTMITFDQGGRWKHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLS
EPKAVGIVIAHGSVGDAISVMIPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHS
SHPINVIKFSTDEGQCWQTYMFTREPIYFTGLASEPGARSMNISIWGFTESFLTRQWVSY
TIDFKDVLERNCEEKDYTIWLAHSADPGDYADGCILGYKEQYLRLRKSSVCQNGRDYVVT
KQPSVCPCSLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPG
DRCQGGVNPVREVKDLKKKCTSNFLSPEKQNSKSNSVPIILATVGLMLVTVVAGVLIVKK
YVCGGRFLVHRYSVLQQHAEANGVDGVDALDTASHTHKSGYHDDSDEDLLE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccccggggagctgcggatggcctctcgcgctggccccacggcctcggcctc
ctccttctcctccagctgctgccgccggagaccttcggccaggaccggctggacgcgccg
ccgccgcccgctgcgccgctgtcgcgctggtccggccccgtcggggtgagctgggggctg
cgcgcggccgcgcccgggggcccagttccccgcggcggccgttggcgccgcagcgcgctc
gaagaggaccaggactgcggccgggtccgggacttcgtcgccaagctggccaacaacacg
caccagcatgtgtttgatgatctcagtgtctcagtatccttgtcctgggttggcgatggc
actgggatcattctggtcttgactaccttccatgtaccactggtaattatgacttttgga
cagtccaagctatatcgaagtgaggactatggaaagaactttaaggatattacaaatctc
atcaataacaccttcattcggactgagtttggcatggctattggtcctgagaattctgga
aaggtgattttaacagcagaggtgtctggaggaagtcacggaggaagaatcttcagatcg
tcagattttgcaaagaactttgttcagaccaatctccctttccatcctctgactcagatg
atgtatagccctcagaattctgattatcttttagctctcagcactgaaaatggcctgtgg
gtgtccaaggattttgggggaaaatgggaagaaatccacaaagcagtatgtttggccaaa
tggggatcagaaaacaccatcttctttaccacctatgcaaatggctcctgcaaagctgac
cttggggcactggaattatggagaacttcagacttggggaaaagcttcaaaaccattggt
gtgaaaatctactcatttggtcttgggggacgtttcctttttgcctctgtgatggctgat
aaggatacaacaagaaggattcatgtgtcaacagatcaaggggacacatggagcatggcc
cagctaccttctgtggggcaggaacagttctattctattctagcagctaatgatgacatg
gtgttcatgcatgtcgatgaacccggagataccggatttggaacaatctttacctcagat
gatcgaggcattgtctactccaagtccttagaccgacatctctacaccaccacaggtggc
gagacagactttaccaatgtgacctccctccgtggggtctacataacaagtgtgctctca
gaagataattccatccagactatgatcacttttgatcaaggaggaagatggaagcatctg
aggaagcctgaaaacagtgaatgcgatgctacagcaaaaaacaagaatgagtgcagcctt
catattcacgcttcctacagcatctcccagaagctaaacgttccaatggccccactctct
gagcctaaggccgtcggcatagtcattgcccacggtagtgtaggggatgccatctcagtg
atgatcccagatgtatacatctcagatgatggcggttactcctggacgaagatgctggaa
ggaccccactattacaccatcctggattccggaggcatcattgtggccattgagcacagc
agccatcctatcaatgtgattaagttctccacagatgaaggtcagtgctggcaaacctac
atgttcaccagggagcccatctactttactggcctcgcttcagaacctggagctcggtcc
atgaatatcagcatttggggtttcacagaatctttcctgactcgccaatgggtctcctac
accattgattttaaagatgtccttgaaaggaactgtgaggagaaggactataccatatgg
ctggctcattccgcagaccccggagattacgcagacggctgcatcttgggctacaaagag
cagtacctgcggcttcgcaagtcatccgtctgccagaacggtcgggactacgttgtgacc
aagcagccatctgtctgtccctgctccctggaggacttcctctgtgattttggctacttc
cgtccagaaaatgactccaaatgtgtggaacagccagagctaaagggccacgatctggaa
ttttgtctgtacggcagagaggagcacctgacaacaaatgggtaccgaaaaattccagga
gacagatgccagggtggcgtgaatccagtccgagaagtaaaagacttgaaaaagaaatgc
acaagcaacttcctgagtcctgaaaagcagaactccaagtcaaattctgttccaatcatc
ctggccaccgtgggattgatgctggtcacagtcgtagcaggggtgctcattgtgaagaag
tacgtctgtgggggaaggttcctggtgcatcgctattccgtgctgcagcagcatgccgag
gccaatggcgtggatggtgtggatgccctggacacagcctcccacactcacaagagtggt
tatcatgatgactcagatgaggacctcctggaatag
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