Lutra lutra (Eurasian river otter): 125097072
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Entry
125097072 CDS
T08100
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
llv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125097072
04120 Ubiquitin mediated proteolysis
125097072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125097072
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125097072
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
U-box type E3
125097072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
125097072
NCBI-ProteinID:
XP_047580431
LinkDB
All DBs
Position
4:complement(190605759..190733794)
Genome browser
AA seq
1358 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPLGPPIAASAPGPSQSLGLSVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSAQTRDENPFASLTATSQPIAAAARSPD
RNLMLATGSNPGTSPMFCGAGSFGASSFSSLYETSPAPSSSFWSAAPVMSPSFASSPARA
ASLMAGPATSLSPHAAAPGSAAGSQPSSPRYRPYTVTHPWGSSTSPIPRSPGISILSSSP
SLPTLASSLQAVPASSPRQRPNSLGPPSLAASPSAASRRPSALRISPSMYDSPFSFLFLA
LSGDSSDEDEEEDGDGDDEGGGGGDEFSCVQFGSSLGASGGASTWDSYSDHFTIETCKET
DMLNYLIECFDRVGIEEKKAPKTCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQQ
PSFLVPYMLCRNLPYGFMQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYP
LMALGELCETKFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDD
AKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAV
VNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPAYVLHPRCRIALPNDE
TRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIR
ELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCL
NFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLY
EPCTQDIVTFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTK
LLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFV
RYINMLINDTTFLLDESLESLKRIHEVQEEMKNKDQWDQLPRDQQQARQSQLAQDERVSR
SYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKY
GFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKF
KLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN
SPTDPFNRQTLTESMLEPVPELKEQIHAWMREKQNSDH
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgcacgacttgctggtgga
cagacctcccagccaaccaccccgctcacctcgccccagagggagaaccctctggggcct
cccatagcagcatcagccccaggcccctcccagagccttggtctcagtgtccacaacatg
accccagctacctccccaataggtgcatcaggagtagcgcatcgaagccagagcagtgaa
ggagtcagttctctcagcagctcgccctccaatagccttgaaacccagtctcagtctctc
tcacgttcccagagcatggatattgatggcgtctcttgtgaaaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaatatggaggttgatgaaaacgatcgaagagaaaagagg
agcctcagcgataaggagccttcctcgggttcagaagtgtccgaagagcaggccttgcag
ctggtctgtaagatcttccgtgtctcctggaaggaccgggacagagatgtcatctttctt
tcttctctttctgcacaatttaagcagaacccaaaagaagtgttctctgattttaaggac
ttgattggccagattttaatggaagtgctaatgatgtctgctcagaccagagatgaaaac
ccctttgccagtctgacggccacgtctcagccaattgcagcagcagctcggtcaccagac
agaaatctcatgctcgctaccggctccaacccaggaactagccccatgttctgcggcgcg
gggtccttcggcgccagctctttctcgagcctctatgaaactagcccagctcccagttca
agtttctggagcgcggcgccagtgatgagtccgtcctttgcctcctcccctgcccgtgca
gccagcctgatggctgggcctgccacttccctcagcccccatgccgcggctcctgggtct
gccgcaggaagccagccctcatctccacggtatcgcccctacaccgtcacccacccgtgg
ggctcttcaacttctcctatcccgcggtcccccggcatctccattctgtccagctcgccc
agcctccccaccctcgctagtagccttcaagcggtgcccgccagctctcccagacagaga
cccaacagcctagggccaccttccctggccgcgtcgcccagtgctgcaagcagacgtccc
tcagccctaaggatctctcctagtatgtacgacagtcctttctccttcctcttcctcgca
ctttctggcgacagtagtgatgaagatgaagaagaagatggtgatggtgatgatgaaggt
ggtggtggtggtgatgagttttcttgtgtccagtttgggtccagtttgggagcctctggt
ggggcaagtacctgggattcctacagtgaccatttcaccattgagacctgcaaggagaca
gacatgctgaactacctcatcgagtgttttgaccgagttgggatagaggaaaaaaaagca
ccaaagacgtgcagccagccggcagtcagccagcttctgagcaacatccgctcgcagtgc
atatcccatactgcgctagtcctgcaaggttccctcactcagccaaggtccatgcagcag
ccgtccttcctggtgccgtatatgctgtgcaggaacctcccatatggcttcatgcaggag
ctggtgcggaccactcaccaggatgaggaagtgttcaagcagatctttatccccatttta
caaggcctggccctcgctgccaaagagtgctcccttgatagtgactacttcaagtacccc
ctcatggctttaggtgagctttgtgaaaccaagtttgggaagacccaccctgtgtgcaat
ttggtggcttctttgccgttgtggttgcctaaatccttaagccccggctctgggcgggag
ctgcagagactgtcctacctgggggctttcttcagcttctcggtctttgcagaagacgat
gctaaggtggttgaaaaatatttctcagggcccgccattaccctggagaacactcgtgtg
gtcagccagtcactgcagcattacctggagctgggaaggcaagagcttttcaagattctg
cacagtattctgttaaacggcgagacccgtgaggctgctctcagttacatggcagccgtt
gtcaacgccaacatgaagaaagcacagatgcagacagatgatagattggtatctacggat
ggattcatgctgaatttcctttgggtgctgcagcagctaagtacaaagatcaagttagag
acggtggaccccgcgtatgtactccacccaaggtgccgcatcgctctccctaatgatgag
acgagagtgaacgcgacaatggaggacgtgaacgactggctggcggagctgtatggagat
cagcctccattttctgagccgaaattccctacagaatgcttttttcttaccctgcacgcc
caccacctctccattctgccaagctgccgtcgctacatccgcagactccgggccatccgg
gagctcaatagaaccgtggaagatctgaaaaacaatgaaagccaatggaaagattccccg
ctggcaactagacaccgcgagatgctgaagcgctgcaaaactcagcttaagaaactggta
cggtgcaaggcctgtgctgacgctggtttacttgatgagagctttctgagaagatgtttg
aatttttatggccttctcatccagctgctgctccgcatcctggaccccgcctatcccgat
ataacactgcctttaaactcagatgtccccaaggtatttgcagcattgcctgagttttat
gtagaagatgttgctgaatttttattttttattgtacaatactctcctcaggtgctttat
gaaccctgtactcaggacattgtgacgttccttgttgtgatgttgtgtaaccagaactac
atccgaaatccgtatctggtggccaaactggtagaagtcatgtttatgaccaaccctgct
gttcagccacgaacccagaagttttttgaaatgatcgaaaaccatcctctctccaccaaa
ttgttggtcccttcactgatgaagttttatacagacgttgagcacaccggagccaccagt
gagttctacgacaagttcaccatccgctatcacatcagcaccatttttaaaagcctttgg
caaaacatagctcaccatggcaccttcatggaggagttcaattcggggaagcagttcgtc
cgctacataaacatgctgataaatgacaccacgtttctgctcgatgaaagtctggagtct
ctgaagcgaatccacgaagtgcaggaagagatgaagaacaaagaccagtgggaccagctg
ccccgggatcagcagcaagcccgtcagtcccagctggctcaggacgagcgtgtgtcccgc
tcctatcttgccctggcaacagaaaccgtggacatgttccatatcctcacgaagcaggtc
cagaagcccttcctcaggccggaacttggaccccgattggccgcaatgctgaactttaat
cttcagcaactctgtggccccaagtgccgtgacctgaaagttgaaaaccccgagaagtac
ggctttgaaccaaagaagctgttggaccaactgacggatatttacctgcagctggactgt
gcccggtttgccaaagccattgccgacgaccagagatcctacagcaaagagttgtttgaa
gaagtgatctcgaagatgcggaaggccgggatcaaatcgaccatagcaatcgagaagttt
aagctcctggcggagaaggtggaggagatcgtggccaagaacgcacgcgcggaaatcgac
tacagcgacgcccccgacgagttcagagaccctctgatggacaccctgatgaccgacccc
gtgcggctgccatccggcaccatcatggaccgctccatcatcctgcggcacttgctcaac
tcccccacagaccccttcaaccggcagacgctgaccgagagcatgctggaaccagtgcca
gaattgaaagaacagattcacgcctggatgagagagaaacaaaacagtgatcactaa
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integrated database retrieval system
