Lutra lutra (Eurasian river otter): 125097109
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Entry
125097109 CDS
T08100
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04140
Autophagy - animal
llv04211
Longevity regulating pathway
llv05010
Alzheimer disease
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05017
Spinocerebellar ataxia
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125097109
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
125097109
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125097109
05014 Amyotrophic lateral sclerosis
125097109
05016 Huntington disease
125097109
05017 Spinocerebellar ataxia
125097109
05022 Pathways of neurodegeneration - multiple diseases
125097109
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125097109
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125097109
03029 Mitochondrial biogenesis [BR:
llv03029
]
125097109
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125097109
Membrane trafficking [BR:
llv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125097109
Mitochondrial biogenesis [BR:
llv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125097109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
125097109
NCBI-ProteinID:
XP_047580521
LinkDB
All DBs
Position
4:80304930..80398485
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTEL
VLSPDMPRTTNQSLLTSFHKSVEHIAPDTTDAENEKEIRESCQSTVQQDETSVDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCIAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPLLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSASSPRIESATG
IATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGKEDIGDHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
LEIRNIIEKVKYSLEITLNEKHQKELQSLKSEYEGKLDALMKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLED
LKKLHVENNEKMQLLRTELQCLEQSHLKELEDALRVRHTQEFEKVIADHKVSLEKLKKEN
QQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEEC
RAQQKETLKSLLEQETENLRTEISKLNQRIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDMLKAELNKVTSLNHQAFEIEKNLKGEIAELQSKLDTELSALEKQKDEKLTQQ
EEKYEAIIQKLEKDKEKLVISQEQDREQLTQKLNCEKEEAIHTALKEFKLERDAVEKELL
EKVKHLENQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNIR
TSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETS
MMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagatctcaagcatgccattcatagcaaatacaagattgctatt
cagcatcaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttcttttcaacaaagaaatgattttg
tgtgatcgtccacctgctattccaaaaactactttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaagaacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaggactgt
tcaaattcttaccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggctgaaatgaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaactaaccaatccttgttaacctcatttcacaag
tcagtggaacatatagccccagataccacagatgctgaaaatgaaaaagaaattagggaa
tcttgtcaaagtactgtccagcaggatgaaacttcagtagatgctaaagacggtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcgttggtcaggaaatgctttgattccatgagcagacttgatccaaggattattcga
ccatttatagcagagtgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagaccggctctatgccctggaccagatgatcgctagctgcagccga
ttggtgaatgaacagaaggaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgttttacctgatttgtgcctgagtcacgcaaatcaattgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caggaactagcaaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattgcaagctttgctccgccttgtaatagaactgttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcatagctgttgtt
gaggttgtaaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcgattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctgtttaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagttcagccactcctcagggtcccctta
ctttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctattgagtgaacaaaaggca
tccatgagtcagacatccccacagtcggcttcgtcaccaaggatagagagtgcaacagga
attgcaactactacctcaccaagaactcctcctccactcactgttcaggatcccttatgt
cctgcagtatgtcccttagaagaattatctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactattcaccaagtttcattagattta
gattcattagcagaaagccctgaatcagattttatgtctgctgtaaatgagtttgtaata
gaagaaaatttgtcatctcctaatcctataagtgatccacagagtccagaaatgatggtg
gaatcactttattcatctgttatcaatgcgatagacagtagacggatgcaggatacaaat
gtatgtggtaaagaggatataggagatcatgcttctctaaatgtccagttggaaaaatgt
cgagttgttgcccaagactcacacttcagtatacaaaccatcaaggaagacctttgccac
ttcagaacatttgtacagaaagaacagtgtgacttctcaaattctttaaaatgtacagca
ctagaaataagaaacattattgaaaaagtaaaatattctctggaaataacactaaatgaa
aaacatcaaaaagagctgcagtctttaaaaagtgaatacgaaggcaaacttgatgcacta
atgaaagaaagtgaagaaaatgaaaacaaaattaaaaagcttaaaggagacttggtatgc
cttgaggaggttttacaaaataaagataacgaatttgctttggttaaacatgaaaaagaa
gctgttatctgcttgcaaaatgaaaaggatcagaagttgttagagatggaaaatataatg
cacactcaaaattgtgaaattaatgaactgaaacagtcacgagagatagtgttagaagac
ttaaagaaactccatgttgaaaataatgagaagatgcagttgttgcggacagaacttcag
tgtttagagcaaagtcatttaaaggagttagaggacgctctgcgtgtcaggcacactcag
gagtttgagaaagttatcgcagaccataaagtgtctttggagaaactaaaaaaggaaaat
caacaacgaatcgatcagatacaagagtctcatgccacagttatccaggaaaaagaacaa
cagttacaggaattaaaactgaaggtttcagatttgtctgacatgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaactgatgaaataaaaattttgctggaagaatgc
agagcccagcagaaggagaccttaaaatctctccttgaacaagagacagaaaatttgaga
acagagataagtaaactaaaccaaaggattcaggataataatgaaaactatcaggtgggc
ttggcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacatgaagaagaatctgatatgcttaaagctgaattaaacaaagtaacatcattg
aatcaccaagcatttgaaatagaaaaaaacctgaaaggagaaatagctgaactgcagagt
aaattggacacagaattgagtgctcttgaaaaacaaaaagatgaaaaacttacccaacag
gaagagaagtatgaagccattattcagaaacttgagaaagacaaagagaaacttgtcata
agccaggaacaagacagagaacagttaactcagaagcttaattgtgaaaaagaagaagct
attcacactgccctaaaagagtttaaattggagagagatgctgttgagaaagagttacta
gaaaaagttaaacatcttgagaatcaaatagcaaagagtcttgccattgaatctaccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagcaaag
tttctagaacaacttgaagagcaagagaaacgaaagaatgaagaaatgcaaaacattcga
acatctctgattgcggaacaacagaccaattttaacactgttttaacaagagagaaaatg
aaaaaagaaaacataatcaatgatcttagtgataagttgaaaagtacaatgcaacagcaa
gaacgagataaagatttgatagagtcactatctgaagatcgagctcgtttgcttgaggaa
aagaaaaaacttgaagaagaagtcagtaagctgcgtagtagcagttttgttccttcagca
tatgtagctgcagccccagaactttatggagcctgtgcacctgaactcccaggtgaaaca
gagagatcagccatggaaacacaagacgaaggaaaagttgattcagcaatggagacaagc
atgatgtctgtacaagaaaatattcatatgctatctgaagaaaaacagagaataatgctg
ttagaacgaacattacagttgaaagaagaagaaaacaagcggttaaatcaaagactgatg
tctcagagcatgtcttcagtatcctcaaggcattctgaaaagatagctattagagatttt
caggttggagatttggtactcataatcctagatgagcgccatgacaattatgtgttattt
actgttagtccaaccttgtattttctgcattcggagtctctgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtacatctagaagaccctgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaag
ttctacagagtgaaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
