Lutra lutra (Eurasian river otter): 125097122
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Entry
125097122 CDS
T08100
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125097122
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125097122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125097122
NCBI-ProteinID:
XP_047580547
LinkDB
All DBs
Position
4:complement(92800914..92874513)
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AA seq
895 aa
AA seq
DB search
MESSGAATCGSHMFGFLRALKTRSRGEAARVLVQEQDLRQWGLTGIHLRSYQLEGVNWLA
QCFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWREEMERFA
PGLSCIMYAGDKEERAHLQQDLKQESRFHVLLTTFEICLKDSSFLKSFPWSVLVVDEAHR
LKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFPKEQVGDFVQHYQ
DIEKESESARELHKLLQPFLLRRVKAEVATELPKKTEIVLYHGMSALQKRYYKAILMKDL
DAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAF
LYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPVFIFL
LSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEI
VCRKAASKLQLTNAVIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMDEIDL
ETILGETKDGQWISEALPTVEGRVGEQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNL
QKKRLEKTTQEGRLLRNKSSVLLPGLAEGSTKRKRILSPEEFEDRRKKRQAAAAKRKRLM
EEKKRKKEEAEHEKKMAWWESNNYQSFCLPSEESEPEDREDERSAQLDYEDPDSTAISYV
SGDVTHPQAGAEDAVIVHCIDDSGRWGRGGLFTALETRSDEPRKIYELAGKMKDLNLGGV
LLFPIDDKESRNSGQDLLALIVAQHRDHANVLSGIKMAALEEGLKKIYLAAKRKNASVHL
PRIGHATKGFNWYGTERLIRKHLAAKGIPTYIYYFPRSRAAVHPPSSSSPGQLAP
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcgggcgccgcgacgtgtgggagccacatgttcggcttcctacgtgctctg
aagacccggagccgaggcgaggcggcgcgggtactagtgcaggagcaggacctaaggcaa
tggggcttgacagggattcatctacgctcttatcagctggagggagtcaactggcttgcc
cagtgcttccatggtcagaatggctgcatcctgggagatgagatgggcctgggtaagacc
tgccagactattgctctcttcatttacttggcaggaagattaaatgatgaaggaccattt
ctgattctttgccccttgtctgttttgagcaactggagagaagagatggagagatttgct
ccaggtctttcctgtataatgtatgcaggtgacaaggaggagagagcccatctacagcaa
gacctaaaacaagagtcacgttttcatgtgctgctaactacctttgagatttgcttgaaa
gattcatcatttctaaaatccttcccatggagtgttcttgttgtggacgaagctcacagg
ttgaaaaaccaaagctccttgctgcataagaccctttcagagttctcagtagtcttcagt
ctcctattgaccggaactcccatccagaacagccttcaagaactctactctcttctcagc
tttgtggagcctgatctctttcccaaggagcaggtgggagattttgttcagcattaccag
gatattgagaaggagtctgagtcagcaagggaactacacaaactcctgcagccatttctg
ttgaggcgggtgaaagctgaggtagctacagagcttcccaagaagacagagatagtgctg
taccatggcatgtcagcactgcagaaaagatactacaaggccattttgatgaaagaccta
gatgcatttgaaaatgagatggcaaagaaagttaaacttcagaatgtcttgtcccagctt
cgaaagtgtgtggatcacccatatctgtttgatggtgtggaaccagagccttttgagatt
ggagaccacctgattgaggccagtgggaaacttcatctattggataagctgctggcattc
ctgtattccaggggccatcgagttttacttttctcccagatgacccagatgttggatatt
ctccaagactacatggactatagagggtacagctatgagcgtgtggatggttctgtgaga
ggagaggagagacacctggccattaagaactttggacagcaacctgtttttatttttctc
ctgagtaccagggcaggaggcgttggcatgaacttaacggctgcagataccgttattttt
gtcgacagtgatttcaatcctcagaatgacttgcaggcagctgccagggctcaccggatt
ggccagaacaagtctgttaaagttattcggctgattggccgagacactgtggaggagata
gtctgtaggaaagcagcctccaaactgcagctgaccaatgcagtcatagagggaggccat
tttactctgggggcccagaaacctgcagctgatgctgacctccagctgagtgagatactc
aaattcggtttggataaactgctgtcatctgagggcagcaccatggatgaaatagacctg
gagacgatcctgggagaaacaaaagatggccagtggatctctgaagccttgcctacagtg
gaaggcagagtcggagagcaagaggaaggcaaaaaccatatgtacttatttgaaggtaaa
gattattccaaggagcctagtaaagaagatagaaaatcatttgagcaactggtgaacctt
cagaaaaagcgtttggagaaaactacgcaagagggccggctactcagaaataaaagcagt
gttctcctcccaggccttgcggaggggtctacgaaaaggaagcggattctgagcccagag
gaattcgaggacagaaggaagaagagacaagcagcagcagccaagagaaagagactaatg
gaggagaagaagaggaaaaaggaagaagcagaacacgagaaaaagatggcctggtgggag
tccaacaattaccagtccttctgcctgccttctgaggagagcgaaccagaggacagggaa
gacgagaggtctgcccagctggattatgaagatccagattcaactgccatcagttacgtt
agcggtgatgtcacccacccacaggctggggcagaggatgctgtcatcgtgcactgcata
gatgactctggtcgctggggccgaggtggtttattcacagctttggaaacacgatccgat
gaaccaagaaaaatatatgagctggctgggaaaatgaaagacttgaatttgggaggcgtc
cttttatttcctattgatgataaagagtcaagaaacagtgggcaagatttgttggccttg
attgtggctcagcaccgtgaccacgcaaatgtcctgtctggcattaagatggcagcccta
gaagagggcctgaagaagatctatttagcagcaaagagaaagaatgcaagtgttcatctt
ccacgcattggacatgccacgaaaggttttaactggtatggcactgagcgacttattcgg
aaacatctggctgcgaaaggcatcccaacttacatatattactttcctagaagcagagca
gctgttcatccaccatcctcttcttccccaggacagctggcaccttaa
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