Lutra lutra (Eurasian river otter): 125097478
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Entry
125097478 CDS
T08100
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125097478
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125097478
Enzymes [BR:
llv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125097478
Protein phosphatases and associated proteins [BR:
llv01009
]
HAD phosphatases
Fcp/Scp phosphatases
125097478
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125097478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
125097478
NCBI-ProteinID:
XP_047581022
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All DBs
Position
4:complement(118638809..118721887)
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AA seq
611 aa
AA seq
DB search
MADSAGHGSSHLKARVPRASRNAAGAKQTNALKQEDASKRRAELEAAVRKKIEFERKALH
IIEQLLEEDITEEFLRECGKFITPAHYSDVVDERSIIKLCGYPLCQKKLGAVPKQKYKIS
TKTNKVYDITERKCFCSNFCYKASKFFEAQIPKTPVWVREEERHPDFQLLQEGQSGHSGK
EVQLCTKAIKTSDIDNPGHFEMHYESSASSSHSDSSSDNEQDFVSTILPGNRPNATGISS
QLPKKSIMKKKAGQKANSKCEDKEETVIAVTEQLGNCRLDSHGKAAACELPLQQVSTQIS
SNSPLQEKLEATENSENKYSSSKITLVGISKKSAEHFKRKFAKSNQVSRSPSRPVQMCPE
VAKANLLKVLKETLTEWKTEETLRFLYGQNYASLCLKLSSSLLAKEEEFDEDDICSDSDK
HSPALQESQNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGRYVLSEETT
KSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLSKVVPGLLGPLHITLGDISAQLKNLIRT
FRLTNRNIIHKPAEWTLIAVVLLSLLTPILGIQKHSQENVVFTQFVETLLEELHLKNEDF
ESLTSIFKTSC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagactccgccgggcacggttcttcccacctcaaggcccgggtcccccgcgcctcc
cgaaacgccgcaggtgctaaacagacaaatgccttaaaacaagaagatgcttctaaaagg
agagcagaactagaagcagctgtgagaaagaaaattgaatttgagagaaaagctctacat
atcattgagcagcttttagaagaggatattacagaagaattcctaagggaatgcgggaag
ttcatcacaccagctcactacagcgatgtcgtggatgaacgttctattattaaactctgc
ggttatcccttatgtcagaagaaactaggagctgtaccaaaacagaaatataaaatttcc
accaaaaccaataaagtctatgatattactgaaagaaagtgtttttgcagcaatttttgt
tataaagcatctaagttttttgaagcacaaattccaaaaactccagtatgggttcgagaa
gaggaaaggcatcctgattttcagctgctacaggaaggacaaagtggccattctggaaag
gaagtacagttatgcactaaggccattaaaacatcagatattgacaatcctggccatttt
gagatgcattatgaatctagtgcttctagctctcatagtgatagtagcagtgataatgag
caagactttgtttccaccattctaccaggaaacagaccaaatgcaacaggtataagttca
cagctgcccaaaaaaagcataatgaaaaagaaagctggtcagaaagctaactccaaatgt
gaagacaaagaagagacagtaatagctgtcactgagcagctaggcaattgcagattagat
agtcatgggaaagctgctgcttgtgaacttcctttacagcaagtaagtactcagatttct
tcaaatagtcctttgcaagaaaaattagaagctacagaaaattctgaaaataaatacagt
agttcaaaaataactctagtaggcataagtaagaaaagtgctgagcattttaagagaaaa
tttgccaaatcaaaccaagtttctaggtcaccctctaggccggtgcagatgtgtcccgaa
gttgcaaaggcaaacttacttaaagtcctgaaagagactttgactgaatggaagacagaa
gaaactttgaggtttttgtatggccaaaattatgcttctttgtgtctgaaactctcttca
tcccttctggctaaagaagaagaatttgatgaagatgacatatgctctgactcagataaa
cattctcctgccttgcaggaatctcagaacagcttggatgagtctttaccttttagggcc
tcagatacagccattaaaccactgccaagttatgagaacttgaagaaagaaacggaaaca
ttaaatctgaggataagggagttttatagaggacgatatgttttgagtgaagaaaccacc
aaatcacaagactctgaagagcatgatcccacctttccactgatagattcaagttctcag
aaccagattagaaaacgcatcgtacttgaaaagttgagtaaagtagtccctggacttttg
gggcctcttcatatcacattaggagatatttctgcacaacttaaaaatctcatccgaact
ttcagattaacaaatagaaatattatacacaaacctgcagagtggaccttaattgctgtg
gtgttgctgtcattactgaccccaattcttggcattcagaagcattctcaggaaaatgtg
gtgtttacacagtttgtagagactttgcttgaagaattacatttaaagaatgaagacttt
gaaagcttaaccagcatatttaaaaccagctgttaa
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