Lutra lutra (Eurasian river otter): 125097904
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Entry
125097904 CDS
T08100
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125097904
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125097904
03041 Spliceosome [BR:
llv03041
]
125097904
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125097904
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125097904
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125097904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
125097904
NCBI-ProteinID:
XP_047582040
LinkDB
All DBs
Position
4:170876003..170926068
Genome browser
AA seq
697 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQGGPKPPI
PPPPPHQQQQQPPPQQPPPQQPPPLQPPPHQPPHQPPPDSSKPVVPQGPGPAPGVGSAPP
ASGSAPPATPPTSGAPTGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPPQTGGPPPPP
TGGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPP
YHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITE
DEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHA
AALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAFER
CSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEY
SQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRME
ELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPRERDM
RMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFGQG
GAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaccggttccggagccgtggcggtggcggtggcggcttccaccggcgcgga
ggaggcggcggccgcggcggcctccacgacttccgctccccgccacccggcatgggcctc
aatcagaaccgcggacccatggggcccggcccgggccagggtggccccaagcccccgatc
ccgccaccgcctccgcatcagcaacagcagcagccaccgccgcagcagccgccaccacag
cagccgccgccgcttcagccgccaccgcatcagccgccgcatcagccgccgccggactcg
tccaagcccgtcgttcctcagggacccggcccggctcccggagtgggcagcgctccgccg
gcctccggctcggcaccgcctgccactcctccgacctccggggcccctacggggccgggc
cccaccccgactccaccgcccgctgtcacctcggcgccccccggggcgcccccgcccgcg
ccgccgagcagcggggtccccaccaccccgcctcagaccgggggcccgccgcctccaccc
acagggggcccgggccccgggcctaagcagggcccggggcccggaggcccgaaaggcggc
aaaatgccaggcgggccgaagcccggcggtggtccgggcctaagcactcctggcggccac
cccaagccgccgcaccgaggcggcggggagccccgcggaggtcggcagcaccacccgccc
taccaccagcagcatcaccaggggcccccgcctggcgggccaggcggccgcagcgaagag
aagatctccgactcagagggatttaaagccaacttgtctctcttgaggaggcccggagag
aaaacttacactcagcgttgtcggttgtttgttgggaatctacctgctgatatcacagag
gatgaatttaaaagacttttcgctaaatacggagaaccaggagaagtttttatcaataaa
ggcaaaggatttgggtttattaaacttgaatctagggcattggctgaaattgccaaagct
gagcttgatgatacacccatgagaggtagacagcttcgggttcgttttgccacacatgct
gctgctctctctgttcgaaatctttcaccttacgtttccaatgaactgttggaagaagcc
tttagccaatttggtcctattgaaagggctgttgtaattgtggatgatcgtgggagatct
acagggaaaggcattgttgaatttgcttctaaaccagcagcaagaaaagcctttgaaaga
tgcagtgaaggtgttttcttactgacaacaactcctcgtccagtcattgtggaaccactt
gaacaattagatgatgaagatggccttcctgaaaaacttgcacagaagaatccaatgtat
caaaaggagagagaaacgcctcctcgttttgcccaacatggcacatttgagtatgaatat
tctcagcgatggaaatccctggatgaaatggaaaaacagcaaagggaacaagttgaaaaa
aacatgaaagatgcaaaagacaaattggaaagtgaaatggaagatgcctatcatgagcat
caggcaaatcttttgcgtcaagatctgatgagacgccaggaagaattaagacgcatggaa
gaacttcacaatcaagaaatgcagaaacgtaaagaaatgcaactaaggcaagaagaagaa
cgacgtagaagggaagaagagatgatgattcgtcagcgtgaaatggaagaacaaatgaga
cgccaaagagaggaaagttatagccgaatgggctacatggatccaagagaaagagacatg
agaatgggtggtggaggagcaatgaacatgggagatccctatggttcaggaggccagaaa
tttccacctctaggtggtggaggtggcataggttatgaagctaatcctggagtcccacca
gcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgctttgggcaggga
ggtgcgggacctgtgggtggacagggtcctagaggaatggggcctggaactccagcagga
tatggtagagggagagaagagtatgaaggcccaaacaaaaagccccgattttag
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