Lutra lutra (Eurasian river otter): 125098332
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Entry
125098332 CDS
T08100
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04659
Th17 cell differentiation
llv04710
Circadian rhythm
llv05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125098332
09159 Environmental adaptation
04710 Circadian rhythm
125098332
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
125098332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125098332
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
llv03310
]
125098332
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125098332
Nuclear receptors [BR:
llv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125098332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125098332
NCBI-ProteinID:
XP_047582995
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All DBs
Position
4:89676089..89699015
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AA seq
518 aa
AA seq
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MDRGPQRQHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CHVVYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQRQQQQQRGQVAKTPPAGGQGADPLACHIGLPDGQLPLGSSPDLPEASACPPGLLRAP
GSGSSYPSSLAKAGPDGASYHLEYSPDRGKAEAGKGFYSTGSQLSPDRCGLRFEDAGHPG
LEEPGRGPDSYCSLSFHSAPEGPYASLTETEHLVQNVCKSYRETCQLRLEDLLRQRPNIF
SREEVAGYQTKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSRSLSSLRFSEDEIALY
TALVLINANRPGLQEKRKVEQLQHNLELAFHHHLYKTHRQGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacaggggcccacagagacagcaccgagcctcgcaggagctgctggctgcaaagaag
acccacacctcacaaattgaagtcattccttgcaaaatctgtggggacaagtcatctggg
atccactacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgccacgtggtctactcctgcacccgccagcagaactgccccatcgaccgcaccagccga
aaccgatgccagcactgtcgcctgcagaaatgtctggcactgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcagagggacagcctgcacgccgaggtgcagaaa
cagcttcagcggcagcaacagcagcagcggggacaggtggccaagaccccaccagcgggg
ggccagggggccgaccccctcgcctgccatatagggctccctgatgggcagctgcccctg
ggctcctcacctgacctgcctgaggcctcggcctgcccccctggcctcctgagagccccg
ggctccgggtcttcctaccccagcagcttggccaaggccgggcctgacggggcctcatac
cacctggaatacagccctgatcggggcaaggctgaggctggcaagggcttctacagcaca
ggcagccagctgagccctgacagatgtggacttcgttttgaggatgccgggcatcctggg
cttgaggaacctggacggggcccggacagctactgcagcctcagtttccacagtgcccca
gaggggccttatgcctccctgacagagactgagcacctggtgcagaacgtttgtaagtcc
taccgagagacatgtcagctgcggctagaggacctgcttcggcagcgccctaacatcttc
tcccgggaggaggtggccggctaccagacgaagtccatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgctaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcaatggaagtg
gtgctggtcaggatgtgccgggcctacaacgctgacaaccacacggtctttttcgaaggc
aaatacggtggcatggagctgttccgagccttgggctgcagtgagctcatcagctccatc
ttcgacttctcccgctccctgagctccttgcggttttctgaggacgagatcgctctctac
acagcgctagtgctcatcaatgccaaccggccagggctccaagagaaaaggaaagtagag
caactgcagcacaacctggagctggcttttcatcaccatctctacaagactcaccgccaa
ggcattctggctaagctgccacccaaggggaaacttcggagcctgtgtagccagcatgtg
gaaaagctgcagaccttccagcatctccaccccattgtggtccaagctgcttttcctcca
ctctacaaggaactcttcagcactgaaattgagtcacctgaaggcctgtccgagtga
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