Lutra lutra (Eurasian river otter): 125098425
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Entry
125098425 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125098425
03015 mRNA surveillance pathway
125098425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125098425
03041 Spliceosome [BR:
llv03041
]
125098425
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125098425
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125098425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
125098425
NCBI-ProteinID:
XP_047583207
LinkDB
All DBs
Position
1:complement(73639966..73643698)
Genome browser
AA seq
919 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKXEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTFSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPV
TKRRSPSLSSKHRKGXSPSWSTREPRSPQPDKRHSPSPRPRAPQTSSSPPPVRRGASSSP
QRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPQ
SPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKH
KKHKKEKAVAAAAAAAAAAVTPAAPTAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEK
HLREKALRSMRKAQVSPQS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaataaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctcctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcttctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaaaagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaanctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatccaggacacggtctcgctctccttctcatactcgacctagacga
cgtcatagatcccgatcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccacctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcgtcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacattcagc
ccccctcgaaaaactcgtaggttatctccttcagcgagtcctcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcagtgacaaaacat
aaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagtagagtta
tctgaatcagaagaagataaaggtggcaaaatggctgcggcagattctgtgcagcagaga
cgtcaatacagacgacagaaccagcagtcttcatctgattctggctcctcttcttcctca
gaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcggcggaga
cattctccttcccggagtgcctctccatcacctcgaaagcgccagaaggagacttcccct
cggatgcaaatgggaaagcgatggcaatcgccagtgactaaaagtggtagacggaggagg
agtccctctccaccacccaccagaaggcgacgttctccttctcctgcccctcctcctcgt
aggcgcaggtctcccacgccgccaccacgacgaaggactccttctcctccaccccgccgg
cgctcaccttctccaagaagatactctcctccaatacagaggagatactctccttcccca
cctccgaagagaagaacagcttctccccctccccctcctaaacgaagggcatcaccatct
ccaccaccaaagcgtcgggtctcccattctccacctcccaaacaaagaagctccccagtc
accaagagacgttcaccttcattatcatcaaagcataggaagggtncttccccgagctgg
tctacgcgtgagccccggtcaccacaaccagacaaaaggcattcgccctcaccacggcct
cgagctcctcaaacctcctcaagccccccacctgttcgaagaggagcgtcgtcatcaccc
caaagaaggcagtccccttctccaagtactaggcccattaggagagtctccaggactccg
gaacccaaaaagacaaaaaaggctgcctcaccaagccctcagtctgtaaggagggtctcg
tcctcccgatctgtctcaggatctcctgagccagcagctaaaaagcccccagcacctcag
tctcctgtccagtcccagtccccctcaaccaactggtcaccagcggtaccggtcaaaaag
gctaaaagcccaacaccaagcccatctccagcaaggaactcagacccagaaggaggtgga
aagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaaacac
aaaaaacacaagaaggaaaaggccgtggcggcagccgcagcagcagcagcagcagctgta
acccctgcggcccccactgcccccacgaccacatcagcacaggaggaaccggaggcagag
cccgagcctaagaaggagaccgaaagcgagcctgaagacaacctcgacgacttagaaaag
cacctgcgtgaaaaggcgctgagatcgatgcggaaggctcaagtgtccccacagtcttag
DBGET
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