Lutra lutra (Eurasian river otter): 125098466
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Entry
125098466 CDS
T08100
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125098466
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125098466
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125098466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
125098466
NCBI-ProteinID:
XP_047583270
LinkDB
All DBs
Position
4:119605228..119722376
Genome browser
AA seq
1483 aa
AA seq
DB search
MLKSNDSLFSLDTLFFEKPGEAKNYPDTEKSLDWFLPPAPLISEIPDTQALEEEIGSHKL
LGQEEKPKMLPSNLKITNENTNYISPTQKFQFAFSLNKYEAGDLNLGGAGNNDLSHVPGK
LTYGISQKYKNHVSTEIIPEKSVPDNTKLFNFAEGKGESTSAFRKRLFKISDNIHEGVNS
NDSTNLDSPIGSVKVAPTEMNKGESWKCSSSKQKRQYSDINMFTASNTLSASEIREEIFK
APTFAVASQPHEVQGVTENDIDSLKAVTEIPAKFRSVFKEFPYFNYIQSKAFDDLLYTDR
NFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPI
GLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVKLVRLFLIDEVHVIK
DENRGPTLEVVVSRMKTVQSLSPASENSGIIIPMRFVAVSATIPNAEDIAEWLSDGERPA
VCLKMDERHRPVKLRKVVLGFPCRSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATR
KGVQQAASVLVKDAKFIMAVEQKQRLQKCAYSIRDLKLRDILIHGVAYHHAGMELSDRKV
VEGAFTIGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGR
PQFDTTATAVIMTRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITDVNIALE
WIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIRMDEDVNFKP
TEAGRLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFVDVQLRINEKKTLNTLNK
DPNRVTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRITRWLSD
FVSVQEKKFAVLLNSLILAKCFRCRLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIE
ETDARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTITLRNFEQL
QTKRTAPDSHYVTLIIGDADNQLVFKHRIMDSVLLKAGNWTKKIDVKRAFNSEDLSINLI
SSEYVGLDIQQKFTVFYLGPKRLENQIVMRKKSETEISHSKHSNRSTIAGPNKGMTACKK
PGNRECNHHCKNKHTCGHDCCKTGVAQRSEMKEPTISSYLSDLRNRNAVLSLPPVKRLKM
QMNKSQSVDLKEFCFTPKPSLPSISRSECLNIPELSIMEQRDQHEICAEVQQEPSEYQDK
DFSRWNYPITSDEKAPQTVLFNRHLNASGNQNLKDVDKSNTPFSKVLNVTFELGDEVWDD
FDDENLLEVTSFSASTEKTKTSGFGNTLSSSIKGNKLFLQESKSKFQGEMAKSFVSSPEK
PDVYLSNSPVFKFDASSMKKSPQQAGNANTVHLQEREQQSLSPEIEKLCFTHSEKIPNSS
HFVKKVDFFIRNSECKEEVDIRYHPDDEADEMKSFLGIFDGIF
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactcgttgttttccttggatactttgttttttgaaaaaccaggt
gaagctaaaaactatccagacactgaaaaatcattggattggtttctcccacctgctcca
ttgatttcagaaattccagatactcaggcattggaggaggaaataggaagtcataaactg
ttaggtcaggaagagaagccaaaaatgttaccatcaaatttaaagataactaatgaaaac
acaaattatatttcaccaacacaaaaattccagtttgccttttccttaaataaatatgaa
gcaggtgatctgaatttaggaggagcaggtaacaatgacttatcacatgttcctggcaag
ctgacatatggtatttctcagaaatacaaaaatcacgttagcactgaaataatacctgag
aaaagtgttccagataatacaaaattatttaattttgcagaaggtaaaggagagagcaca
tcagccttccgaaaaagattgtttaaaatatctgataatatacatgagggtgttaactct
aatgacagtacaaacttggactctcctattggctcagtgaaagttgccccaacagaaatg
aacaaaggggaatcatggaaatgtagtagtagtaaacagaaacgtcaatattcagacatt
aacatgtttacagcaagcaatactctttctgcttctgaaatcagggaagagatattcaaa
gcaccaacttttgcagttgcatcccagcctcatgaagttcaaggagtaacagaaaatgat
atagattccttgaaggctgtcacagaaatcccggcaaaatttagaagtgttttcaaggaa
ttcccatatttcaactatatacaatccaaagcctttgatgatcttctttacacagatagg
aattttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactagctata
acaagattattaatggaagtcccattgccatggtcaaatattaaaattgtttacatggca
ccaataaaagccctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaata
ggattgaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcag
catgcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggaga
gacaactctttggtcaagctggttagactctttctcattgatgaggtacatgttataaaa
gatgaaaatcgtggaccaactcttgaagttgtagttagcagaatgaaaactgtacagtct
ttatctcctgcttctgaaaatagtggcataattattccaatgagatttgtagctgtatct
gcaacaattccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcg
gtatgcctgaaaatggatgagagacataggccggtgaaacttcggaaagtggttcttgga
ttcccctgcagaagtaaccaaactgaatttaagtttgatttaaccctcaactacaaaatt
gccagtgttatacaaacatactctgatcagaaacccacacttgtgttttgtgcaacaagg
aaaggtgtacaacaggctgcttctgttcttgtgaaagatgctaaatttatcatggctgtg
gaacagaaacagaggttacagaagtgtgcatattccataagagatttgaaactgagagat
atcttaatacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagta
gttgaaggagctttcactattggagatctaccagttctttttactaccagtactttagct
atgggagtaaatttgcctgctcacctggtagttataaaatctacgatgcattatgctgga
ggaatgtttgaagagtacagtgaaacagatattctgcagatgattggtagagctggtcga
cctcaatttgacactacagctactgcagttattatgactcggttaagtacaaaagagaaa
tatattcagatgttagcttgtagtgacactatagaaagcagtttacacagacatcttatt
gaacatttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaa
tggatacgatcaactttgctttatatcagagccttgaaaaatccatctcattatggtttt
gcatctggattgaacaaagatggaattgaagcaaaattacaagaattatgtttgaagaat
ctgaatgatttatcatctctggacttgataaggatggatgaagatgttaatttcaaacca
actgaggcaggaagattgatggcttggtattacattacatttgagacagtgaagaaattt
tgtactatcagtggaaaggagactttattagatctggtcacaatgatagccagctgcaag
gaatttgtagatgtgcagttaaggataaatgaaaagaaaacactgaatactttgaacaaa
gatccaaatcgggtaacaatcagatttccaatggaaggaagaattaaaacaagagaaatg
aaagtaaattgtcttattcaggctcagctaggatgcattccaatacaagactttgctttg
acacaagatacctcaaagattttcagaaatggctcacgaattacaagatggttatcagat
tttgtgtctgttcaagaaaagaagtttgctgtactattgaacagtttgattttagctaaa
tgttttagatgcagactttgggaaaactctctacatgtatccaaacagctggaaaaaatt
ggtataacattgtcaaatgcaatggtaaatgcaggtttgacctcctttaaaaaaatagaa
gaaacagatgcaagggaacttgaactgattttaaatagacaccccccttttggaacgcaa
ataaaagaaacagtgatgtatctgccaaaatatgaacttgaagtggaacagattgcaaga
tatagtgacaccatggcagaaatattagtgaccattacattaagaaattttgaacagcta
caaactaaaagaacagcaccagattctcactatgttaccttaatcataggtgatgcagat
aatcagctggtttttaagcacagaattatggattctgttttgctaaaagctggaaattgg
actaaaaagattgatgtgaagagagcttttaattctgaagatctcagcataaatctaatt
agttctgaatatgttggactcgatattcagcagaaatttacagtcttttacttaggaccg
aagaggcttgaaaatcaaatagtaatgcgaaaaaaatcagaaacagagatttcccattct
aaacattcaaatagatctacgatagcaggacccaataaaggaatgactgcttgcaaaaaa
cctgggaatcgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgc
tgtaaaactggagttgcacagaggtcagagatgaaagagccaacaatctcttcatattta
tctgatttaagaaacaggaatgctgttttatcacttcctcctgttaaacgtctcaagatg
caaatgaataagtctcaaagtgtggaccttaaagaattttgttttactccaaaaccttct
ctccccagtatatcaaggtcagagtgtttaaacatacctgaattgtctataatggagcag
agggatcaacatgaaatctgtgcagaagttcaacaagaaccatcagaatatcaagataaa
gatttctctagatggaactatcctataacttcagatgagaaagcccctcaaacagtgctg
ttcaacagacatcttaatgcatctggaaaccagaatttgaaagatgtggacaaaagtaat
actccattctcaaaagttttgaatgtgacctttgaattgggagatgaagtttgggatgat
tttgatgatgagaacttattagaagttaccagtttttcagccagtactgagaagacaaaa
acatcaggatttggaaacactttgagttcaagtatcaaaggaaataagctattcctccag
gagtcaaagagcaaattccaaggagaaatggcaaaaagttttgtttcatcgcctgagaag
ccagatgtttatttatcaaattctcctgtgttcaagtttgatgcatcctccatgaaaaaa
tcacctcaacaagctggaaatgcaaatactgtccatttacaagaaagagagcaacaaagc
ctgtcaccagaaattgaaaagctgtgctttactcactctgaaaaaataccaaattcttca
cattttgttaagaaagtggatttctttattagaaacagtgaatgtaaagaggaagttgat
atcaggtatcatcctgatgatgaagctgatgaaatgaagtcttttctgggaatatttgat
ggtattttctaa
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