Lutra lutra (Eurasian river otter): 125098890
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Entry
125098890 CDS
T08100
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125098890
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125098890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125098890
NCBI-ProteinID:
XP_047584072
LinkDB
All DBs
Position
4:193841690..193897211
Genome browser
AA seq
1948 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYRTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPPLAVSPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESD
FDSASIHSSSVRSEGSAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDMEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLA
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLP
ALGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPASLDRVEGEDKHESSDGKERLEETE
KAPPSPEQLPKEEVLPEKEKILDKLELSLIHSRGDGNDFKPDDTRVEEKEPIETQQNGDK
EEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNNN
FGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaggaagaagatggtggccttggaggctttgacgactacttc
cctgaggagcccgtaggccttcccaagaagaagaaatccaagaagctcaaggagaaccgg
tccaaagggaagcggaagaagaaagaggggagcaacgatgagctgtcagagaacgaagag
gatctggaagagaagtcagagagtgagggcagcgactactcccctaataaaaagaagaag
aaaaagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggatgatgatgag
gacgataatgacgacgggtgtctgaaggagcccaagtcctcagggcagctgatggccgag
tggggcctggatgacgtggagtacctgttctcggaggctgactaccgcacgctgaccaac
tacaaggccttcagccagttcctcaggcccctcatcgccaagaagaacccgaagatcccc
atgtccaaaatgatgacagtgctgggagccaagtggcgggagttcagcgccaacaaccct
ttcaagggcagctcagcagcggccgccgcggcagccgtggctgcggccgtggagacagtc
gccatcgcccctccactggctgtcagtccccagcaggccccccagcctgtacctatccgc
aaggccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaaggctccaag
gatgccaagaagaaaggcaaggggagaaaggtggccgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagcgaggaggacgagcgggaggagtcggac
ttcgacagcgccagcatccacagctcctccgtgcgctccgagggctccgctgccctgggg
aagaagagcaagaggcgtcgcaagaagaggaggattgacgacggggatggctacgagacg
gaccaccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgtgacacc
tgtccgcgggcctaccacctcgtctgccttgacccagagctggagaaggctccggagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaaggacgacgag
gacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgcccccctctgaagggcaaagtccagcggatcctacactggaggtggacggagccc
cctgcccccttcatggtggggctgccggggcctgacatggagcccggtgtccccccaccc
aagcccctggaaggcattccggagagagagttctttgtcaagtgggcggggctctcctac
tggcactgctcctgggtgaaggaactacagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaatgacatggacgagcctccgcccttcgactatggctccggcgat
gaggacggcaagagcgagaaaaggaagaacaaggaccctctctacgccaagatggaggaa
cgtttctaccgctacggcatcaagcccgagtggatgatgatccaccgtatcctgaaccac
agctttgacaagaagggagacgtgcactacctgatcaagtggaaagatctgccctatgac
cagtgcacctgggagatcgacgacatcgacatcccctactatgacaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaagacgccaggctccccaagagactggcc
aagaagggcaagaagctgaaggacgataagcaggagaaaccgccagacacacccattgtg
gatcccacagtcaagttcgacaagcagccttggtacattgactccacgggcggcacgctg
cacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacggac
accatcttggccgacgagatgggtctgggcaagactgtgcagaccatcgtcttcctctac
tccttgtacaaggaggggcactccaagggaccctacctggtcagtgcacccttgtccacc
atcatcaactgggaacgtgagtttgagatgtgggcacccgacttctatgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaatgagttttcttttgaggacaac
gccattcggagcgggaagaaggtgttccgtatgaagaaagaagcgcagatcaaattccac
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggacgaggcccatcggctgaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgactacaagctgctgctgacggggaccccccttcag
aacaacctggaggagctcttccacctcctcaacttcctgactccagagcggttcaacaat
ctggagggcttcctggaggaatttgccgatatctccaaggaagaccagatcaagaagctc
cacgacctgctggggccgcacatgctgaggcggctcaaggctgacgtgttcaagaacatg
ccggccaagaccgagctgatcgttcgtgtggagctgagccagatgcagaagaaatactac
aagttcatcctcacgcggaacttcgaagcgctcaactccaagggcggggggaaccaggtg
tcgttgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttccct
gtggctgccgtggaggcccccgtcttgcccaacggctcatacgatggcagctcgctggtc
aagtcctcaggcaagctcatgctgctgcagaagatgctgaagaagctgcgagacgaaggg
caccgcgtactcatcttctcccagatgaccaagatgctggaccttctggaggacttcctg
gagtatgagggctacaagtatgagcgcattgatggtggcatcactgggggcctccgacaa
gaggcgatcgacagattcaacgcccctggggcacagcagttctgcttcctcctctcgaca
cgagcggggggcctgggcatcaacctggccacagcagacaccgtcatcatctatgactcg
gactggaatccacacaatgacatccaggccttcagccgcgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgctttgtgacgcgggcctcggtggaggagcgtatcacgcag
gtggccaagcggaagatgatgctgacccacctggtggtgcggcctggcctcggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggcctgtcacgcccatccct
gatgtccagtcctccaaagggggagccttggctgccagcgccaagaagaagcacggcagc
accccgccaggcgacaacaaggacgtggaggacagcagcgtgatccactacgacgatgcg
gccatctccaagctgctggaccggaaccaggacgccacggacgacacggagctgcagaat
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgggaggaggacggc
gtggaggaggtagagcgggaaatcatcaagcaggaggagaatgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaagaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcggataaccagtccgaatattccatcggctctgaggatgaggat
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatctcggaggcagctg
aagagcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgag
gtgctgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgctggggt
atgcccccccaggacgccttcaactcccactggctggtgcgggacctacgcgggaagagc
gagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcagagacctttgcggacggcgtgccccgtgagggcctctcaaggcagcacgtg
ctcacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcatgtt
aacgggaagtacagcaccccggacttgatccccgaagggcctgagggcaagaagccgagc
gaggtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctcccg
gcactgggcctgccagacaaaatggaagcccagctgggctacatggacgagaaggagctg
ggggttcagaagccaaagaagcccccagaaatccaggccctgccagcttccctggacaga
gtggagggcgaggacaagcatgagagctcggatggcaaggagcggctggaggagacggag
aaggccccaccatccccagagcagctgccaaaagaagaagtgcttcctgagaaggagaag
attctggacaagctggagctgagcttgattcacagcagaggggatggcaatgatttcaag
ccagatgacaccagagtggaggagaaggagcccattgaaacacagcaaaatggtgacaaa
gaggaagatgaggaggggaagaaggaagacaagaatgggaagttcaaattcatgttcaat
attgcagacgggggcttcacagagttgcacacactgtggcaaaatgaggaacgtgccgcc
gtgtcctcggggaaaatctacgacatctggcaccggcgccatgactactggctgctggcg
ggcatcgtgacgcacggctatgcccgctggcaagacatccagaatgacccgagatacatg
atcctcaatgagcccttcaagtccgagatccacaagggcaactacttggagatgaagaac
aagtttctggcccgcaggttcaagctgctggagcaggctttggtcatcgaggagcagctc
cggagggctgcataccttaacatgacccaggaccccaaccaccccgccatggccctcaac
gcccgcctggctgaggtggagtgccttgctgagagccaccagcacctgtccaaggagtcc
cttgccgggaacaagccggccaacgccgtcctgcacaaggtcctgaaccagctggaggag
ctgctgagcgacatgaaggccgacgtgacacgcctgccctccatgctgtcccgtatcccc
cccgtggccgcccgcctccagatgtcggagcggagcatcctgagccgcctgaccaaccgg
gccggcgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaacaac
tttgggcccaacttccggggccccggaccgggagggattgtcaactacaaccagatgccc
ctggggccctatgtgaccgatatctag
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integrated database retrieval system
