KEGG   Lutra lutra (Eurasian river otter): 125098966
Entry
125098966         CDS       T08100                                 
Name
(RefSeq) histone-binding protein RBBP4-like
  KO
K10752  histone-binding protein RBBP4
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03082  ATP-dependent chromatin remodeling
llv03083  Polycomb repressive complex
llv04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125098966
   03083 Polycomb repressive complex
    125098966
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    125098966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:llv03036]
    125098966
Chromosome and associated proteins [BR:llv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     125098966
  Histone modification proteins
   HAT complexes
    HATB complex
     125098966
   HDAC complexes
    Sin3A-HDAC complex
     125098966
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     125098966
    PRC2.2
     125098966
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     125098966
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125098966
  Chromatin remodeling factors
   NuRD complex
    125098966
   NuRF complex
    125098966
   NuRF complex (fruit fly)
    125098966
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st ANAPC4_WD40 Beta-prop_DCAF12 eIF2A WD40_MABP1-WDR62_1st WD40_RFWD3 MIOS_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 125098966
NCBI-ProteinID: XP_047584219
LinkDB
Position
4:complement(27746742..27748974)
AA seq 421 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNLASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINH
EVEVNRARYVPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL
SWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDVKTIFTGHTAVVDVSWHLLHESLFG
SVTDDQKLMIWDTHSNSTSKPSHSVDAYTAEVNCLSFNPYSEFILATGSADKTVALWDLR
NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP
ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPEGQG
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggccgacaaggaagcagcctttgatgacgcagtagaagaacgtgtgatcaacgaagag
tacaaaatatggaagaagaacaccccttttctttacgatttggtgatgacccatgccctg
gagtggcctagcctaactgcgcagtggcttccagatgtaaccagaccagaagggaaagac
ttcagcattcatcgacttgttctgggaacacacacgtccgatgaacagaacctagccagt
gtgcagctccctaacgatgatgctcagtttgatgcttcacactacgacagtgagaaagga
gaatttggaggttttggctcagttagtggaaaaattgaaatagaaatcaagatcaaccat
gaagtagaagtaaaccgggcacgttatgtgccccagaacccttgcatcattgcaacaaag
actccatccagtgatgttcttgtttttgactatacaaaacatccttccaaaccagaccct
tctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggctatggactt
tcttggaacccaaatctcagtgggcacttacttagtgcttcagacgaccacaccatctgc
ctctgggacatcagtgctgttccaaaggaaggaaaagttgtggatgtgaagaccatcttt
acagggcatacagcagtagtagatgtttcctggcatctgctccatgagtctctgtttggg
tcagttactgatgatcaaaaacttatgatctgggatactcattcaaacagtacttccaaa
ccaagccactcagttgatgcttacactgctgaagtgaactgcctatctttcaatccttac
agtgagttcattctggccacaggatcagccgacaagactgttgccttgtgggatctgaga
aatctgaaacttaagttgcattcctttgaatcacataaggatgaaatattccaggttcag
tggtcgcctcacaatgagaccattttggcttccagtggtactgatcgcagactgaatgtt
tgggatttaagtaaaattggagaggaacaatccccggaagatgcagaagatgggccacca
gaattgttgtttattcatggtggtcacactgccaagatatctgatttctcctggaatccc
aatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaagtgtggcaaatg
gcagagaacatttacaatgatgaagatcctgaaggaagcgtggatccagaaggacaaggg
tcctag

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