Lutra lutra (Eurasian river otter): 125099091
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Entry
125099091 CDS
T08100
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
125099091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125099091
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125099091
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
DUF7694
Motif
Other DBs
NCBI-GeneID:
125099091
NCBI-ProteinID:
XP_047584393
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Position
4:61875902..61957978
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AA seq
1120 aa
AA seq
DB search
MRRSLRKMLSPGKQEEPQGAVYQGVENDMDDSEDSLKVVFEGSTCRLKNLLKKRKKLSKY
DDMNASPLHHAAAEGHVELMEMIINDSSFEVLNIMDDYGNTPLHWAAEENQVESVKFLLS
KGANPNLRNSSMMAPLHIAVQSLHNEVMKVLTEHSSTDINLEGENGNTAVIIACSKDNSE
ALQILLNKGAKPCKSNKWGCFPIHQAAFSGAKKCMEIILKFGEEHGYSRQSHINFVNNGK
SSPLHMAVQSGDLEMIKMCLDNGAQLELMENGKCTPLHFAATQGATEIVKLMLSSYSGSS
DIVNAVDGNNETLLHRASLFDHHELAGYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGARVDIKDHFGRNFLHLTVQQPHGLKNLQPEFMQMQHIKQLVMDEDDDGCTPLHY
ACRHGIPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDMSDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNLK
CTDQLDEEGNTALHFAAREGHAKAVALLLSYDADIVLNKQQASFLHVAIHNKRKEVVLTT
IKNKRWEECLKVFSHYSPSNKCPVMEMVEYLPECMKVLLDCCIIPSTGDKSCKDYHMEYN
FTYLQCPLEFTKKVTPAQDVTYEPLTTLNVMVQHNRIELLNHPVCKEYLLMKWLAYGFRA
HVMNLGSYCIGLLPMTFLVTSIKPGMAFNSTGIINETRDHSEILDTKNSYFIKVCMILVF
LSSIFGYCKEVVQIFQQKRNYILDNANAVEWIIYTTSIIFVSPLFVDIPASVQWQCGAIA
IYFYWMNFLLYLQRFENCGIFIVMLEVIVKTLLRSTVVFVFLLLAFGLSFYVLLSLQDAF
SSPLLSIIQTFSMMLGDINYRDAFLEPFLRNELAYPVLSFIQIIAFTMFVPIVLMNLLIG
LAVGDIAEVQKHALLKRIAMQVELHTSLEKKLPLWFLRRVDQKSIIVYPNRPRCSGLLRI
FHFLFHTKETRQEIPNVDTSLEIEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHSSFQDRFKKELLEQRNSKWNSVLKAVKTKTHNPLP
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcctgaggaagatgctgagccctgggaagcaggaggagccccagggcgca
gtctaccagggtgtggagaacgacatggacgactccgaggactcgcttaaggtggttttt
gaaggaagtacatgtagacttaaaaaccttctgaagaaacgaaagaaattaagcaaatat
gatgatatgaatgcatcccctttgcaccatgctgcagcagaaggtcatgtggagctgatg
gagatgatcatcaatgactcctcttttgaagtgctgaacatcatggatgattatggaaat
acccctctgcactgggctgcagaagaaaaccaggttgaaagtgtgaagtttcttcttagc
aaaggagctaacccaaacctccggaacagcagcatgatggcgccccttcacatagctgtg
cagagcttgcacaacgaggtgatgaaggtcttgactgagcacagcagtacagatattaat
ttggaaggagaaaatggaaacacagctgtgataattgcatgttccaaagacaacagtgaa
gcactgcaaatcttgttaaataaaggagctaagccatgtaaatcaaataaatggggatgt
ttccctattcaccaggctgcgttctcaggtgccaaaaaatgcatggaaataatattaaag
tttggtgaagaacatggatatagtagacagtctcacattaactttgtgaataatgggaaa
tctagccccctgcacatggctgttcaaagtggtgacttggagatgattaaaatgtgcttg
gacaacggtgcacagttggaactgatggaaaacgggaagtgcacaccccttcattttgct
gccacccagggagccactgagattgttaaactgatgctatcctcttattctggtagcagc
gatattgtcaacgcagtggatggaaataatgagacactccttcacagagcctcactattt
gatcaccatgaactggcaggctacttaatttcagtgggagcagatattaatagcactgat
tcagaaggacgttctccacttatattagcaactgcctctgcatcttggaatattgtaaat
ttgctactctctaaaggtgcccgtgtagacataaaagatcattttggacgtaattttttg
catttgacggtacagcagcctcatggattaaaaaatctgcaacctgagtttatgcagatg
cagcatattaaacaactagtaatggatgaagatgatgacgggtgtacccctctacattat
gcgtgtagacatgggattcctgtctctgtaaataacctacttgactttaatgtgtccatt
cattccaaaagtaaagataagaaatcacccttacattttgcagccagttatgggcgaatc
aacacctgtcagaggcttctgcaagacatgagtgacacgaggcttttgaatgaaggtgac
ctccatggaatgacacctctgcacctagccgcaaaaaatgggcatgataaagtagttcaa
cttcttctgaaaaaaggtgcattatttctcagtgaccacaatggctggactgctttgcat
catgcttccttaggcgggtacactcagaccatgaaggtcattcttgacactaacttgaag
tgcacagatcagctagatgaagaagggaacactgcgcttcactttgctgcaagggaaggc
catgccaaagccgttgcacttcttctgagctacgatgctgacatcgtcctgaacaagcag
caggcctcctttttgcatgttgcaattcacaataagaggaaggaggtagttcttacgacc
atcaagaacaaaagatgggaagaatgccttaaggtttttagtcattattctccaagcaat
aaatgtccagttatggaaatggtagaataccttcctgaatgcatgaaagtccttttagat
tgttgcataataccctccacaggagacaagtcttgcaaagactaccatatggagtataat
ttcacgtatcttcagtgtccattagaatttaccaagaaggtaacacctgcacaggatgtt
acatatgagcctcttacaaccctcaatgtaatggtacaacataaccgcatagaacttctc
aaccatcctgtgtgtaaagaatacttacttatgaaatggctggcttatgggtttagagcc
catgttatgaacttaggatcttactgtattggtctcctacctatgacatttcttgttacc
agtataaagccaggtatggctttcaactcaactggaatcatcaatgaaactcgtgatcat
tcagaaatattagacactaagaattcatattttataaaagtttgtatgattttagttttt
ttgtcaagtatatttggatattgcaaagaagtggtccaaattttccaacagaaaaggaac
tatattttggataatgccaatgcagttgaatggattatctacacaacaagcatcattttt
gtgtcccccttattcgttgatataccagcttctgtgcagtggcaatgtggggcaattgct
atatacttctactggatgaacttcttattgtatcttcagaggtttgaaaattgtggaatt
ttcattgttatgttggaggtaattgtgaaaactttgttaaggtctacggtcgtgtttgtc
ttccttcttctggcttttggtctcagcttttacgtcctcctgagcttgcaggatgccttc
agctctccattgctttctataatccagaccttcagcatgatgctaggagatattaattac
cgtgatgccttcctagaaccgtttttgagaaacgaattggcatatccagttctgtccttt
atacagattattgcctttaccatgtttgttccaattgtgctcatgaatttacttattggt
ttggctgttggcgacattgcggaggtccagaagcatgcgttgttgaagaggattgctatg
caggtggaacttcataccagcttagagaagaagctgcccctctggttcctacgcagagta
gaccagaaatccatcattgtgtatcccaacagacccagatgttcagggttattgcgtata
tttcattttctttttcacaccaaagaaacaagacaggaaattccaaatgttgacacatct
ctagaaatagaaatattgaagcagaagtatcggctgaaggatctcacttctcttttggaa
aaacagcatgagcttatcaaactcatcattcagaagatggaaatcatctctgagacagag
gatgaagataaccatagttcttttcaagacaggtttaaaaaagaactgttagaacaaagg
aatagcaagtggaattctgtgttgaaagctgtaaagacaaagacccacaaccctttgccg
tag
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