Lutra lutra (Eurasian river otter): 125099266
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Entry
125099266 CDS
T08100
Name
(RefSeq) pre-mRNA-splicing factor SYF2-like isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125099266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125099266
Spliceosome [BR:
llv03041
]
Complex B
Other components
Prp19-related factors
125099266
Complex C
125099266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125099266
NCBI-ProteinID:
XP_047584683
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All DBs
Position
4:complement(179173711..179180190)
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AA seq
269 aa
AA seq
DB search
MPGREAHEPWDPAAVRGIGPGRPASSRSSPRQVPVDSAEEGERPLAGAVDLAAQKREQRL
RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKACLEWELQEEEKKKECAARGED
YEKVKLLEISAEDAERWERKKRRKNPDLGFSDYAAAQLRQYHRLTKQIKPNMETYERLRE
KHGEEFYPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINER
NAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggggagggaggcgcacgaaccgtgggatccggcggcagtgaggggaattggcccc
ggccgccccgcctctagccggtcctctccgcggcaggtgccggtggacagcgcggaggag
ggggagcggcccctcgcaggggccgtggatctggccgcccagaagcgtgaacagaggctg
cgcaagttccgggagctgcacctgaagcggaatgaagctcgaaagttaaaccaccaggaa
gttgtggaggaagataaaagacttaaattacctgcaaactgggaggctaaaaaagcttgt
ctggaatgggagctgcaggaagaagaaaagaaaaaagaatgtgcggcaagaggggaggac
tatgagaaagtgaagctgctggagatcagtgcagaagatgcagaaagatgggagaggaag
aagaggaggaaaaaccctgacctgggattctcagattatgctgctgcccagttacgccag
tatcatcggctgaccaagcagatcaaacctaacatggaaacttatgaaagactgagagaa
aaacatggagaagagttctacccaacatccaacagtcttcttcatggaacccatgtgccc
tccacagaggaaattgataggatggtcatagacttggaaaagcaaattgaaaaacgagac
aagtatagtcggagacgtccttataatgatgatgcagatattgactacattaatgaaagg
aatgccaaattcaacaagaaggcagaaaggttctatgggaaatatacagctgaaattaaa
cagaatttagagaggggaacagcagtctaa
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