Lutra lutra (Eurasian river otter): 125099317
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Entry
125099317 CDS
T08100
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv03083
Polycomb repressive complex
llv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125099317
03083 Polycomb repressive complex
125099317
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125099317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125099317
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125099317
Histone modification proteins
HAT complexes
HATB complex
125099317
HDAC complexes
Sin3A-HDAC complex
125099317
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125099317
PRC2.2
125099317
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125099317
Heterochromatin formation proteins
Other heterochromatin formation proteins
125099317
Chromatin remodeling factors
NuRD complex
125099317
NuRF complex
125099317
NuRF complex (fruit fly)
125099317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125099317
NCBI-ProteinID:
XP_047584778
LinkDB
All DBs
Position
4:complement(173181445..173205298)
Genome browser
AA seq
439 aa
AA seq
DB search
MRPGRVARTANGVTGLANPTAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT
AQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFG
GFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGE
CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH
TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE
FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD
LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE
NIYNDEDPEGSVDPEGQGS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccggccgcgtcgcgcgaacggctaacggagtgacgggcctggctaacccgaca
gcctttgatgacgcagtagaagaacgtgtgatcaacgaagagtacaaaatatggaagaag
aacaccccttttctctacgatttggtgatgacccatgccctggagtggcctagcctaact
gcgcagtggcttccagatgtaaccagaccagaagggaaagacttcagcattcatcgactt
gttctgggaacacacacgtccgatgaacagaaccatcttgtgatagccagtgtgcagctc
cctaacgatgatgctcagtttgatgcttcacactacgacagtgagaaaggagaatttgga
ggttttggctcagttagtggaaaaattgaaatagaaatcaagatcaaccatgaaggagaa
gtaaaccgggcacgttatatgccccagaacccttgcatcattgcaacaaagactccatcc
agtgatgttcttgtttttgactatacaaaacatccttccaaaccagacccttctggagag
tgcaacccagacttgcgtctccgtggacatcagaaggaaggctatggactttcttggaac
ccaaatctcagtgggcacttacttagtgcttcagacgaccacaccatctgcctctgggac
atcagtgctgttccaaaggaaggaaaagttgtggatgcgaagaccatctttacagggcat
acagcagtagtagaagatgtttcctggcatctgctccatgagtctctgtttgggtcagtt
gctgatgatcaaaaacttatgatctgggatactcgttcaaacaatacttccaaaccaagc
cactcagttgatgctcacactgctgaagtgaactgcctatctttcaatccttacagtgag
ttcattctggccacaggatcagccgacaagactgttgccttgtgggatctgagaaatctg
aaacttaagttgcattcctttgaatcacataaggatgaaatattccaggttcagtggtcg
cctcacaatgagaccattttggcttccagtggtactgatcgcagactgaatgtttgggat
ttaagtaaaattggagaggaacaatccccggaagatgcagaagatgggccaccagaattg
ttgtttattcatggtggtcacactgccaagatatctgatttctcctggaatcccaatgaa
ccttgggtgatttgttctgtatcagaagacaatatcatgcaagtgtggcaaatggcagag
aacatttacaatgatgaagatcctgaaggaagcgtggatccagaaggacaagggtcctag
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