Lutra lutra (Eurasian river otter): 125099782
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Entry
125099782 CDS
T08100
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
llv05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125099782
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125099782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125099782
03009 Ribosome biogenesis [BR:
llv03009
]
125099782
03036 Chromosome and associated proteins [BR:
llv03036
]
125099782
Enzymes [BR:
llv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
125099782
Messenger RNA biogenesis [BR:
llv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
125099782
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
RNase
125099782
Prokaryotic type
rRNA processing factors
125099782
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
125099782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
125099782
NCBI-ProteinID:
XP_047585154
LinkDB
All DBs
Position
5:complement(25308442..25428937)
Genome browser
AA seq
1373 aa
AA seq
DB search
MQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
TFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPMP
PPVPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPN
FNSFQNNPSSFPPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYEDHRHRDHSHGRG
ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERSYKKEYKRSGRSYGLLVVPEPAGCTPELPGEIIKNTDSWAPPPETVNHRSPSREKK
RARWEEEKDRWSDSQSTGKEKNYTSIKEKEPEETLPDKNEEEEEELLKPVWIRCTHSENY
YSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSS
ESECESDEDSTCLSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAK
ARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIF
EGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYD
WNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIAN
MLQWEELEWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQ
LSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVE
LSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPS
HHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSR
INHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRF
MLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNY
PLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLG
HNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAI
TNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDP
KSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE
MGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDETEDIKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaatacgtgtcatagaatgtcgttccacccaggacgagggtgtccccgaggg
cgaggaggacatggagccagaccctcagccccagccttcaggccccaaaatctgagacta
cttcaccctcagcagcctcctgtgcaatatcaatacgaacccccaagtgccccttctacc
acgttctcaaactctccagcccccaattttctgcctccacgaccagactttgtccccttc
cctcctcccatgcctccatcagcccaaggccctcttcccccctgccctatacggcccccc
ttcccaaaccaccagatgaggccccccttccccgtgcctccctgttttcctcctatgccg
ccaccagtgccctgtcctaataaccccccagtccctggagcacctcctggacaaggcact
ttccccttcatgatgccccctccttccatgccccatcccccaccccctccggtcatgcca
cagcaggtcaattatcagtaccctccaggatactcacaccataatttcccacctcccaat
tttaatagcttccagaacaaccccagttctttcccacccagtgctaataatagcagtagt
cctcattttaggcacctccctccatacccactcccaaaggctcccagtgagagaaggtcc
ccagaaaggctcaagcactatgaggatcacaggcaccgggatcacagtcacgggcgaggc
gagaggcatcggtccctggatcggagggaacgaggccgaagtcctgacaggagaagacaa
gacagccgctacagatcagattacgaccgagggagaacgccctcccgtcaccggagctat
gagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatcacca
tctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttacggtttgctg
gttgtccctgaacctgctggatgcacaccagaattacctggggagattattaaaaataca
gattcttgggccccacccccggagactgtgaatcatcgctccccaagtagggagaaaaag
agagctcgttgggaggaagaaaaagacagatggagtgatagccagagcactggcaaagag
aagaattatacctcaataaaggaaaaagagccggaggagacactgcctgacaaaaatgag
gaagaggaagaagaacttcttaagcctgtgtggatccgctgcacccactcagagaactac
tactccagtgaccccatggatcaggtgggggattctactgtggttggaacaagtaggctg
cgtgacttatacgataaatttgaggaagagctggggagtaggcaagaaaaggccaaagct
gctagacctccgtgggagcctcctaagacaaagctagatgaagatttggagagttcgagt
gaatccgaatgtgagtctgatgaggacagcacctgtttgagcagctcagactctgaagtt
tttgacgtcattgcagaaatcaagcgcaaaaaggcccatcctgaccgactacatgatgag
ctttggtacaatgacccagggcagatgaatgatgggccactctgcaaatgcagcgccaaa
gccagacgcacaggaatcaggcacagcatttatcccggagaagaggccatcaagccctgt
cgtcccatgaccaacaatgctggcagacttttccactatcgaattacagtctcccctcct
acaaactttttgactgacaggccaactgttatagaatatgatgatcatgagtatatcttt
gaaggattttctatgtttgcacatgcccccctgaccaatattccactgtgtaaagtaatc
aggttcaacatagactacacaattcacttcattgaggagatgatgcccgagaatttttgt
gtgaaaggacttgaactcttttcattattcctgttcagagatattttggaattgtatgac
tggaatcttaaaggccctttgtttgaagacagccctccctgctgcccaagatttcatttc
atgccacgttttgtgagatttcttccagatggaggaaaggaagtgctgtccatgcaccag
attctcctttacttgttacggtgtagcaaagccctggtccctgaagaggagattgccaat
atgcttcagtgggaagaacttgagtggcagaaatacgcagaagaatgcaaaggcatgatt
gtcaccaaccctggaatgaaacctagctctgtccgcattgatcaactggatcgtgaacag
ttcaaccccgatgtgattacttttccgattatcgtccactttgggatacgccctgcacag
ttgagttatgcaggagacccacagtaccagaaactgtggaagagttatgtgaaacttcgc
cacctcctagcaaatagtcccaaagttaaacaaactgacaaacagaagctagcacaaagg
gaggaagcactccaaaaaatacgacagaagaatacaatgaggcgagaagtaacagtggag
ctaagtagtcaaggattttggaaaactggcatccgttctgatgtctgtcagcatgccatg
atgttgcctgtcttgacccatcatatccgctaccaccaatgcctaatgcatctagacaag
ttgataggatatactttccaagatcgttgtctgttacagctggccatgactcatccaagt
catcacttaaattttggaatgaatcctgatcatgccaggaattctttatctaactgtgga
attcgacagcccaaatatggagatagaaaagttcaccacatgcatatgaggaaaaaagga
attaacactttaataaatattatgtcacgccttggccaagatgaccccactccctcaagg
attaatcacaatgaaagattggagttcctaggtgatgctgttgttgaatttctgaccagt
gtccatttatactatttgtttcctagtctggaagaaggaggattagcaacttatcgaact
gccattgttcagaatcaacaccttgccatgttagcaaagaaacttgaactggatcgattt
atgctttatgctcatggacctgacctttgtagagaatcagaccttcggcatgcaatggct
aattgttttgaagcgttaataggagctgtttacttggagggaagcctggaggaagccaaa
cagttatttggacgcttactctttaatgatccggacctgcgtgaagtctggctcaattat
cctctccacccactccaactacaagagccgaatactgatcgacagcttattgagacttct
ccagttctgcagaaacttactgagtttgaagaagcaattggagtaatttttactcatgtt
cgacttctggcaagagcgttcacgttgagaactgtgggatttaaccatctgactctaggc
cacaatcagaggatggagttcctaggtgactccataatgcaactggtagccaccgagtac
ttatttattcatttcccagaccatcatgaaggacacttaactttgttgcgaagctctttg
gtgaataacagaactcaagccaaggtagctgaggagctgggcatgcaggaatatgccatc
accaatgacaagaccaagagacctgtggctcttaggaccaagaccttggcagaccttttg
gaatcattcatcgcagcgctgtacattgataaggatttggaatatgttcatactttcatg
aatgtttgcttcttcccacgattaaaagagttcattttgaatcaggattggaatgacccc
aaatcccagcttcagcagtgttgcttgacgctcaggactgaaggaaaggagccagacatt
cctctgtacaagactctgcagacggtaggaccctcccatgctagaacctacacggtggca
gtgtatttcaagggagaaagaataggatgtgggaaaggaccaagtattcagcaagcagaa
atgggagcagcaatggatgcactggagaaatataactttccccagatggcccatcagaag
cggttcattgaacggaagtacagacaagagttaaaagaaatgaggtgggaaagagagcat
caagagaaagagccagatgagactgaagacataaagaaataa
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