Lutra lutra (Eurasian river otter): 125099806
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Entry
125099806 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125099806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125099806
03016 Transfer RNA biogenesis [BR:
llv03016
]
125099806
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125099806
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125099806
Transfer RNA biogenesis [BR:
llv03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125099806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
125099806
NCBI-ProteinID:
XP_047585223
LinkDB
All DBs
Position
5:4978770..5030011
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AA seq
795 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMQIWETSQGVGRGGSGFASYFCLNSPALDTAVAAGAAGLG
GGGGGGGLAGPALPAASPPPPAPGPAALPPALLTALGPATEGARRLHKSPSLSSSSSSSS
NAESGTESPGCSSSSSSSASLGRAGGGRGGAFFHFADGPPSAPGAANGHPGPRGPAPAGS
PPQHQFHPGRRKRENKASTYGLNYLLSGSRAAALSGGGGPGPQAPRPGTPWKSRAYSPGI
QGLHEEIIDFYNFMSPCPEEAAMRREVVKRIETVVKDLWPAADVQIFGSFSTGLYLPTSD
IDLVVFGKWERPPLQLLEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNM
ETGVRAAELIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLH
PRIDARRADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSM
LCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKV
TQEVIDYRRWIKEKWGGKAPPAPELDNRIKIKERVSACDGDPPQHRDPESPFSQRLTLSL
PSPQLLSSGSSASSVSSLSGSDIDSDTPPCTTPNVYQFSLQAPTPLLAGLPTALPMPSGK
PQSATSRTLVMTTNTQTRFTIPPPTLGVAPVPCRQVSVEGTPALKAVHHMSSPAIPSASP
NPLSSPHLYHKQHSGMKLSLKGSHNHSQGGTYSSVGSGGVRPPVGNRGHHQYNRTGWRRK
KHTHTRDSLPVSLSR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgcgtggcctggatccagcccgagcagaaggggccggccaatgccctgtgg
atgcagatctgggagacctcgcagggcgtgggccgcggcgggtcgggcttcgcgtcctac
ttctgcctcaactcgcccgcgctggacaccgcggtcgcggcgggggcggcggggctgggc
ggcggcggcggtggcggcggcctggcggggcccgcgcttcccgccgcgtcgcccccgccg
cccgcgcccggccccgccgcgctgccccccgcgctgctgacggcgctcgggcccgcgacc
gagggggcccggcgcctgcacaagtcgccgtcgctgtcgtcgtcgtcgtcgtcctcgtcc
aacgccgagtcgggcaccgagagccccggctgctcgtcgtcgtcctcgagcagcgcctcg
ctcggccgggcgggcggcggccgcggcggcgccttcttccacttcgccgacggcccgccg
agcgcccccggcgcggccaacgggcaccccgggccgcgcggccccgcgcccgccggctcc
ccgccgcagcaccagttccacccgggccgccggaaacgcgagaacaaggccagcacctac
ggcctcaactacctgctgtcgggcagccgtgcggccgcgctgagcggagggggcggcccc
gggccccaggcgccgcggcccggcacgccttggaagagccgcgcgtacagccccggcatc
cagggacttcatgaggaaatcattgacttttataacttcatgtccccttgtcctgaagaa
gcagccatgagacgggaggtggtgaagcggattgaaaccgtggttaaagacctctggcca
gcggctgacgtccagatattcggcagcttcagcacaggcctctacctcccgaccagtgac
atcgacttagtggtctttggaaagtgggagcgccctcctctgcagctgttggagcaagct
ctgcggaagcacaacgtggccgagccgtgctccatcaaagtccttgacaaagctacagta
ccgataataaaactcacagaccaggagactgaagttaaagtcgacatcagctttaacatg
gagactggggtccgggcagcagagctcatcaagaattatatgaagaaatattcattgctg
ccttacttgattttagtattgaaacagttcctcctgcagagggacctgaatgaagttttt
acaggtggaattagctcatacagcctaattttaatggccattagttttctacagttgcat
ccgagaatcgatgcccgaagagctgatgaaaaccttggaatgcttcttgtagagtttttt
gaactctatggaagaaattttaattacttgaaaactggtattagaataaaagaaggaggt
gcctatatcgccaaagaagagatcatgaaagccatgaccagtgggtacagaccgtcgatg
ctgtgcattgaggaccctctgctgcctggaaacgacgttggccgcagctcatacggggcc
atgcaggtgaagcaggtgtttgactatgcctacattgtcctcagtcacgccgtgtcaccc
ctcgcgaggtcctatcccaacagagactcagaaagtactctaggaagaatcatcaaagtg
acccaggaagtgatcgactaccggcggtggatcaaggagaagtggggcggcaaggccccc
ccggcgcccgagctggacaacagaattaagataaaagaacgagtaagtgcttgcgacggg
gatccgccccagcaccgggacccggagtcccccttcagccagcgcctgaccttgtctctg
cccagcccccagctgctctcgtcaggctcttccgcctcctcagtgtcttcgctttctggg
agtgacattgactctgacacgccgccctgcacaacgcccaacgtttaccagttcagtctg
caagcaccaacgcctctgctggccggcttacccaccgccttgcccatgccgagcggcaaa
cctcagtccgccacttccagaacgttggtcatgacaactaacactcagaccaggtttacg
atacctccaccgaccctgggggtggcccccgtcccttgcagacaagtcagcgttgaagga
actccggcgttgaaggctgttcaccacatgtcttccccggccattccgtccgcatctccc
aacccgctctcaagccctcacctgtatcacaagcagcacagcggcatgaagctgtccctg
aaaggctcccacaaccacagccagggcggcacgtacagctctgtgggcagtggaggcgtg
cggccccccgtgggcaaccgaggacaccaccagtacaaccgcaccggctggaggaggaaa
aaacacacgcacacgagggacagcctgcccgtcagtctgagcagataa
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