Lutra lutra (Eurasian river otter): 125099808
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Entry
125099808 CDS
T08100
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04810
Regulation of actin cytoskeleton
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125099808
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125099808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125099808
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125099808
Factors involved in mRNA localization
Other mRNA localization factors
125099808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
125099808
NCBI-ProteinID:
XP_047585224
LinkDB
All DBs
Position
5:48963145..49088058
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEVIKNVPL
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccacgtgaccctggaggatgccctgtccaacgtggacctgctggaggagctg
cccctccccgaccagcagccatgcattgagccgccgccgtcctccatcatgtaccaggct
aattttgacacaaacttcgaggacaggaatgcatttgtcacaggcattgcaaggtacatt
gagcaggctacggtccattccagcatgaatgaaatgctggaggaagggcacgagtatgcg
gtcatgctttacacctggcgcagctgttcccgggccatcccgcaggtaaaatgcaatgag
cagcccaaccgggttgagatctacgagaagacagtggaggtgctcgagccggaggtcacc
aagctcatgaagttcatgtactttcagcgcaaggccatcgagcggttctgcagtgaggtg
aagcggctgtgccatgcagagcgcaggaaggacttcgtctccgaggcctatctcctgacc
ctgggcaagttcatcaacatgttcgccgtcttggatgaactaaagaatatgaagtgcagc
gtcaagaacgaccactctgcctataagagggcagcccagttcctgaggaagatggcggac
ccccagtctatccaggagtcacagaacctttccatgttcctggccaaccacaacaggatc
acccagtgtctccatcagcaactggaagtgatcccaggctatgaggagctgctggcagac
attgtcaacatctgcgtggactactacgagaacaagatgtacctgacccccagtgagaag
cacatgctcctcaaggtaatgggttttggtctctacctgatggatggaaacgtcagtaac
atttacaaactggatgccaagaagagaatcaacctcagcaaaattgataagttctttaag
cagctgcaagtggtgccccttttcggcgacatgcagatagagctggccagatacattaag
accagtgctcactatgaagagaacaagtccaagtggacgtgtacccagagcagcatcagc
ccccagtacaacatctgcgagcagatggttcagatccgggacgaccacatccgcttcatc
tccgaacttgctcgctacagtaacagcgaggtggtgacaggctccggactggacagccag
aagtcagacgaggaataccgagagctcttcgacctggccctgcggggcctgcagctttta
tccaagtggagcgcccatgtcatggaggtgtactcctggaagctggttcaccccacagac
aagttctgcaacaaggattgccctggcacggcggaggagtatgagagagccacacgctac
aactataccagcgaggagaagttcgccttcgtcgaggtgatcgccatgatcaaaggcctc
caggtcctcatgggcaggatggagagcgtcttcaaccaggccatcaggaacaccatctac
gcagccctgcaggacttcgcccaggtgactctgcgtgagcccctgagacaggcggtgcgg
aagaagaagaacgttcttatcagtgtcctacaggcaattcgaaaaaccatctgtgactgg
gaggggggccgagagccccccaatgacccgtgcttgagaggggagaaggatcccaagggg
ggatttgacatcaaggtgccccggcgtgctgtggggccctccagcacacagctgtacatg
gtgcggaccatgctcgaatcgctcatcgcagacaaaagtggctccaagaagacgctgaga
agcagccttgacggacccatcgtcctcgccatagaggacttccacaagcagtccttcttc
ttcacgcacctgctcaatattagtgaagccctgcagcagtgttgtgacctctctcaactg
tggttccgagaattcttcctggagttaaccatgggccggcgaatccagttcccaattgag
atgtccatgccctggattctaacagaccatatcctggaaaccaaagaaccttccatgatg
gagtacgtcctctaccccttggacctgtacaatgacagcgcctactatgctctgaccaag
tttaaaaagcagttcctgtacgatgagattgaagctgaggtgaacctgtgctttgatcag
tttgtctacaagctggcggaccagatctttgcctactacaaagccatggctggcagtgtc
ctgttggataaacgttttagggccgaatgtaagaattatggagtcatcattccgtaccca
ccgtccaaccgctacgaaacactgctgaaacagagacatgtacagcttttgggtagatca
attgacttgaacagactcattacccagcgcatctctgctgccatgtataaatccttggac
caggccatcagccgctttgagagtgaggacctgacttccattgtggagctggagtggctg
ctggagatcaaccggctcacgcaccgcctgctctgtaagcacatgaccctggacagcttc
gacgccatgttccgggaggccaaccacaacgtgtctgccccctatggccgcatcaccctc
cacgtcttctgggagctgaactttgacttcctccccaactattgctacaacgggtccacc
aaccgttttgttcgaactgccattccttttacccaagaaccgcaaagagataaacccgcc
aatgtccagccttattacctctatggatccaagcctctcaacattgcctacagccacatc
tacagctcatacaggaactttgtgggcccccctcacttcaagaccatctgcagactcctg
ggttaccagggcattgcggtggtcatggaggaactcctgaagatcgtcaagagcctgctc
caaggaaccattctccagtacgtgaaaacactgatcgaggtgatgcccaagatttgccgc
ttgccccggcacgagtatggctccccagggatcctggagttcttccaccaccagctgaag
gacataattgagtatgcagagctcaagacagacgtgttccagagcctgagggaggtgggc
aatgccatcctcttctgcctgctcatagagcaagctctgtctcaggaggaagtctgtgat
ttgctccatgctgcacccttccaaaacatcttgcctagagtctacatcaaagaaggggag
cgtctggaggtccgcatgaaacgcctggaagccaagtatgccccacttcacctcgtccct
ctgatagagcggctggggaccccccagcaaatcgccatcgctcgggagggcgacctgctg
accaaggagcggctgtgctgtggcctgtccatgttcgaggtcatcctgacacgcattcgg
agctacctacaagaccccatttggcggggccccccacccaccaacggcgtcatgcacgtc
gacgagtgcgtggagttccaccggctctggagtgccatgcagttcgtctactgcatccct
gtggggaccaacgagttcacagctgagcaatgttttggtgatggtttgaactgggccggc
tgctccattatcgtcctgctgggccagcaacgtcgcttcgacctgtttgacttctgttac
cacctgctgaaagtccagaggcaggacgggaaggatgaggtcattaagaatgtgcccctg
aagaagatggcagacagaattaggaagtaccagatcttgaacaatgaggtttttgccatc
ctgaacaagtacatgaagtccgtggagacagacagttccaccgtagagcacgtgcgttgc
ttccagccacccatccaccagtccctggccacgacctgctag
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