Lutra lutra (Eurasian river otter): 125099828
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Entry
125099828 CDS
T08100
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125099828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llv03400
]
125099828
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125099828
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
FapA
Motif
Other DBs
NCBI-GeneID:
125099828
NCBI-ProteinID:
XP_047585254
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Position
5:109407289..109685301
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AA seq
333 aa
AA seq
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MERKVSRICLASEPDIIHFLQVAWEKTLGSGFVITLTDGQSAWTGTVSESAISQEADDMA
LEKEKYVDELRKALVSGGRPTDAYKFDFSRESCHFSFEKNLKDVSFRLGSFSLEKVASPA
EVIRKLICDCLDTITENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF
ILVLNEKKAKIRNLHKLLSEVQELEKNIEHERETTTHSEMAADRDAIYDESTDEESENLP
DRSALAPTALRGDDSPVSSPDVTDIAPSRKRRQRMQKNLGTEPKMASQVPGPQEEEKFDP
PLPETSKKEHSSAENMSLETLRNSSSEDLFDEI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaagtaagcagaatctgtcttgcttctgaacctgatataattcattttcta
caagtggcttgggagaaaacattaggatctggttttgttattacacttactgatggtcag
tcagcatggaccgggacagtttctgaatcagcgatttcccaagaagccgatgacatggca
ttggaaaaagagaaatatgttgatgaactgagaaaagcattggtatcaggaggaagacca
actgatgcatacaaattcgatttttctagagagtcttgtcatttctcctttgagaaaaac
ctgaaagatgtttcattcagacttggttccttcagtctagagaaagttgcaagtccagct
gaggtcattagaaaacttatttgtgattgcctggacaccatcacagaaaaccaagccaag
aatgagcacctgcagaaggaaaatgaaaggcttttgagagattggaatgatgttcaagga
cgatttgaaaaatgcgtcagtgctaaggaagctttggagactgatctttataaacggttt
attctggtgctgaatgagaagaaagcgaagattagaaacttacataagttgttaagtgaa
gttcaagaactagaaaagaacattgagcatgaaagggaaaccacaacacattctgaaatg
gctgctgacagggatgcaatctatgatgaaagcactgatgaagagagcgaaaacttgcct
gatcgctctgcgttagctccaactgctttaagaggagatgattcccctgtttcaagtcct
gatgtcacggatattgcaccaagtagaaagaggcggcagcggatgcagaagaatcttggg
acagaacctaaaatggcttctcaggtacctgggcctcaagaagaggagaagtttgatcct
ccactacctgagacgtcaaaaaaggagcacagctcagctgaaaacatgtctttagaaact
ctaagaaacagtagttcagaagacctctttgatgagatttaa
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