KEGG   Lutra lutra (Eurasian river otter): 125099877
Entry
125099877         CDS       T08100                                 
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03420  Nucleotide excision repair
llv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125099877
  09124 Replication and repair
   03420 Nucleotide excision repair
    125099877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:llv04121]
    125099877
   03400 DNA repair and recombination proteins [BR:llv03400]
    125099877
Ubiquitin system [BR:llv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125099877
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125099877
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 125099877
NCBI-ProteinID: XP_047585426
LinkDB
Position
5:complement(91530503..91589641)
AA seq 396 aa
MLGFLLARQAGLDDPLRLQRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEARYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADIFNFEETIYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRCEYVLATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVNNDSRKGLKFTVS
CGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFHSNFQELYSGSRDCNILA
WVPSLYEPVPDDDEPTTKSQINPAFEDAWSSSDEEG
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgttagggtttttattagcgagacaggcgggtttggacgaccctcttcgcctccagaga
gcggagtccacacggagggttttgggactggagttaaacaaagacagagatgttgaaaga
atccatggcagtggagttaacacccttgacattgaacctgttgaagcaagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgatcttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgttccgttggcagaaaccatcctgatgttcacaaatac
agtgtggagactgtacagtggtatcctcatgacaccggcatgtttacatcaagctccttt
gataaaactctgaaagtgtgggatacaaatacattacaaactgcagatatatttaatttt
gaagaaaccatttatagtcatcatatgtctccagttgccaccaaacactgtttggtagca
gttggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attttacagggtcacagacaagaaatattggcagtttcctggtcgcctcgttgtgaatat
gtcttggcaactgcaagtgctgacagtagagtaaaattatgggatgtgagaagagcatca
ggatgtttaattactcttgatcagcataatggaaaaaagtcacaggctgttgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcatctc
cttactgttggtacagataatcgaatgaggctctggaatagttccaatggagaaaacaca
ctagtaaactatggaaaagttaataatgacagcagaaaaggactgaaattcactgtctcc
tgtggctgcagttcagaatttgtttttgtaccatatggtagcactattgctgtttataca
atttactcaggagaacagataactatgcttaagggacattataaaagtgttgactgctgt
gtattccactctaatttccaggaactttatagcggtagcagagactgcaatatacttgct
tgggtaccatccttatatgaaccagttcctgatgatgatgagcctacaaccaaatcacag
ataaatccagcatttgaagatgcatggagcagcagtgatgaggaaggatga

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