Lutra lutra (Eurasian river otter): 125099924
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Entry
125099924 CDS
T08100
Name
(RefSeq) protocadherin beta-11-like
KO
K16494
protocadherin beta
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125099924
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125099924
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125099924
NCBI-ProteinID:
XP_047585508
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Position
5:79726389..79730418
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AA seq
887 aa
AA seq
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MVALQDNIGGVKTLNRTMFWTRLPSRCALSGGKTERTRLQGANYKLLNRVKILRPLKIRW
TLAETRFPKLRREAEAILQEAFLKGTMENGRADTLQIRQVLLLFVLLGMSQAGSESGHFS
VAEEMQSGSFVGNLAKDLGLEVGELFSRGAQVVSNDNKRRLQLDINTGDLLLSESLDREE
LCGSTEPCVLHFQVLMKNPLQFLRIELQVRDINDHSPAFLEKEMLLEIPENSPVGAVFLL
ESAKDLDVGINALKNYTISPNSYFHIKMRVNPDNRKYPELVLDKALDYEEQSELSFILTA
MDGGSPPRSGTATVQVVVVDTNDNSPEFEQPFYEVKIPENSLLGSLIVTVSASDLDSRKN
GEISYSFSHASEDIRKTFEINQKSGEVILTSPMDFETTESYSIIIQATDGGGLFGKSTVR
IQVMDVNDNAPEIAVSSITSPVPENLLEAVVMVFSIRDRDSGDNGKMICSVPEDLPFILK
SSVENYYTLETEGMLDRESQAEYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQT
SYTLRVLENNSPALHIGSVSATDRDSGANAQVTYSLLPPHDPQLPLGSLVSINADNGQLF
ALRSLDFEALQAFEFRVGAADRGSPALSSQALVRVLVADANDNAPFVLYPLQNGSAPCTE
LVPRAAEAGYLVAKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARPLSERD
AVKHRLLVLVRDHGEPPLSASVTLHVLLVDGFSQPYLPLPDAAAAEARADPLTVYLVVAL
ASVSSLFLFSVLVFVAVRLCRRSRAASGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVC
LTEGSGTGEFKFLKPIIPNFPPQRSGKETEENPTFHNSFGFIYRDHN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctgcaggataacatcggcggtgtaaaaacactgaaccggacgatgttctgg
actcggttaccctcccggtgcgctctgagcggtgggaagacagaaagaacacgccttcaa
ggtgcgaactacaagctactcaacagggttaaaatccttaggcctcttaagattaggtgg
acattagcagagacacgtttcccaaaactgcgaagagaagctgaagcgattctgcaggaa
gctttccttaaaggaactatggagaacggaagggcagacactctgcagataaggcaagtc
ctgcttctttttgttttgctaggaatgtctcaggcgggttccgaatctgggcacttttcg
gtggcagaggaaatgcagagcggaagctttgtaggcaatttggcaaaggacctgggacta
gaagtgggtgagctgttctcaaggggggctcaggtggtctctaatgataacaaaagacgt
ttgcagctggacataaacaccggagatttgctcttaagcgaatcactagaccgggaggag
ctctgtggctccacggagccctgtgtgttgcatttccaggtattaatgaaaaaccctttg
cagtttttacgaattgagctccaggtcagggatataaatgaccactctcctgccttctta
gaaaaagaaatgctcctagaaatcccagagaatagtcctgttggtgctgtattcttacta
gaaagtgcgaaggatttagatgtaggaatcaacgctctaaagaactacacaataagcccc
aactcttatttccacattaaaatgagagtcaatccagacaataggaaatatccggagttg
gttctggacaaggcactagattatgaagagcagtccgagctcagtttcatcctcactgct
atggatggcgggtctccgcccaggtccgggactgccacggttcaggtcgtggttgtggac
actaatgacaactcccctgagtttgagcagccattttatgaggtgaagattccagagaat
agtctattaggctcactcattgtcaccgtctcagcttcggatttagactccagaaaaaat
ggagaaatatcatattctttttcccatgcctcagaagatattcgcaagacatttgaaatt
aatcaaaagtccggagaagtcattttaacctcacccatggattttgaaacaactgaatca
tactcaataatcattcaagccacagatgggggcggtctctttggaaaatcaacagtcaga
attcaggtgatggatgtgaatgacaatgctcctgaaatcgctgtgtcatcaattaccagt
ccagtcccagaaaatttgctggaggctgtggttatggtttttagcatccgagacagagac
tctggggacaatgggaagatgatttgttctgtcccagaagacctccctttcatactaaaa
tcttccgttgagaattactacacactggaaacagaggggatgttggacagagagagccag
gccgagtacaacatcaccatcaccgtcaccgacctggggacccccaggctgaaaactcag
cacaacctaacggtgacggtgtccgacgtcaacgacaacgccccgaccttcagccagacg
tcctacaccctgcgcgtcctcgagaacaacagccccgcgctgcacatcggcagcgtgagc
gccaccgacagagactcgggcgccaacgcccaggtcacctactcgctgctgccgccccac
gacccgcagctgccgctgggctcgctggtgtccatcaacgcggacaacgggcagctgttc
gcgctcaggtcgctggatttcgaggcgctgcaggcgttcgagttccgcgtgggcgcggcc
gaccgcggctcgccggcgctcagcagccaggcgctggtgcgcgtgctggtggcggacgcc
aacgacaacgcgcccttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgag
ctggtgccgcgggcggccgaggcgggctacctggtggccaaggtggtggcggtggacggc
gactcgggccagaacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctg
ttcggcgtgtgggcgcacaacggcgaggtgcgcacggcgcggccgctgagcgagcgcgac
gccgtcaagcacaggctgctggtgctggtccgggaccacggcgagccgccgctgtcggcc
agcgtcacgctgcacgtgctgctggtggacggcttctcgcagccctacctgccgctgccg
gacgcggcggcggccgaggcccgcgccgacccgctcactgtctacctggtggtggccttg
gcgtccgtgtcgtcgctcttcctgttctcggtgctggtgttcgtggcggtgcggctgtgc
aggaggagccgggcggcgtcggggggcggctgctcggtgcccgagggcccgtttccgggc
cacctggtggacgtcagcggcgcggggaccctgtctcacagctaccagtatgaggtgtgt
ctgacggaaggatctgggactggtgagttcaagttcttgaagccgattatccccaacttc
ccaccccagcgctctgggaaagagacggaagaaaatcctacattccataatagctttggg
ttcatatatagagaccacaattaa
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