Lutra lutra (Eurasian river otter): 125099926
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Entry
125099926 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125099926
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125099926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125099926
NCBI-ProteinID:
XP_047585509
LinkDB
All DBs
Position
5:79754629..79757593
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AA seq
804 aa
AA seq
DB search
MEAAKERFPRLRQVLLFVLLSHTWAEQDDYRIAEETERGSFVANLAKDIGLAIRELSWRR
ARIIFTNDKKYFQLNLQTGDLQVNDKLDREELCGPMEPCVLQFQVLLEEPLEVYRYKLLV
TDINDNSPVFPEAEMILKIMENTLPGTAFPLKNAQDLDVGINNIQNYTIYPNSHFHVLTH
NSGEGRKYPELVLDKVLDREEQPELRLTLLAVDGGVPPKTGTALVLIDILDINDNAPEFA
QPLYHVQIVENSPLGSVIVTVSARDLDTGTNGEVFYSFFYGDEEISRTFALDELTGEIKI
IRTLDFEKIMSYELDIKASDGAGLSGKCTVIIEVVDINDNTPELTVASLISSIPENSPET
TIALFSIQDQDSGDNGRMVCSIHEDVPFTLKPSVENFYKLVTEGELDRESQAEYNITITV
TDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTTYTLRVRENNSPALHIGSVSATDRDSGAN
AQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFEALQAFEFRVGAADRGSPALSS
QALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQNAWLS
YQLLKATEPGLFGVWAHNGEVRTARPLSERDAVKHRLLVLVRDHGEPPLSASVTLHVLLV
DGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAASGG
GCSVPEGPFPGHLVDVSGAGTLSHSYQYDVCLXGESGTREFKFLKFVVSTQQKPVKDMEE
NXKFVNSFGFNYEFRLRNLGSFEI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcaaaggagcgctttcctagactaaggcaagttcttctctttgttttgctg
tctcacacttgggcggagcaggacgattaccgtatcgctgaagaaacagagcgtggctct
tttgtggccaatctagcaaaggacatagggctagcgataagagagctgtcttggcggagg
gctcggatcatttttacaaatgacaaaaaatattttcagctgaaccttcagacgggagat
ttacaagtaaatgataaactggatcgggaggaactgtgtggccccatggagccttgtgta
ctgcaattccaagtgttactggaagaacctttagaggtatataggtataagcttttggtc
actgacataaatgacaattcccctgtgttcccagaagcagaaatgattttgaaaatcatg
gaaaatactcttccagggactgcgtttcccctgaaaaatgcacaagatttggatgtaggt
atcaataatatccaaaactacaccatttatcccaactcccatttccatgttcttacccac
aatagcggtgaaggcagaaaatacccggaactagttctggacaaagtgctagatcgagag
gagcagcctgagcttaggttaactctcctggcagtagatggtggagttcctcctaaaact
gggactgccttggtcctcattgatatcttggacatcaatgacaatgcccctgagtttgcg
cagccactctatcatgtacagatcgtggaaaacagtcctctgggatcggttattgtcact
gtttcagctagagatttagatacaggaacaaatggtgaagtattctattcatttttttat
ggcgatgaagagattagtaggacatttgcacttgatgaactcacaggagaaattaaaata
attaggacactagattttgaaaaaattatgtcatatgagctggatattaaggcttctgat
ggggcaggtctttctggaaaatgcactgtcataatagaggtggtggatataaatgacaac
accccagaactgacggtggcttcacttataagctccatcccagaaaattcccctgagacc
acgatagctcttttcagtattcaagaccaagattctggggacaatgggaggatggtttgt
tccatccacgaagatgttccgttcactctgaaaccttccgttgagaatttctacaagcta
gtaacagaaggagagctagacagagagagccaggccgagtacaacatcaccatcaccgtc
accgacctggggacccccaggctgaaaacccagcacaacctaacggtgacggtgtccgac
gtcaacgacaacgccccgaccttcagccagacgacctacaccctgcgcgtccgcgagaac
aacagccccgcgctgcacatcggcagcgtgagcgccaccgacagagactcgggcgccaac
gcccaggtcacctactcgctgctgccgccccacgacccgcagctgccgctgggctcgctg
gtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcgctggatttcgaggcg
ctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctcagcagc
caggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcgcccttcgtgctgtac
ccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgggcggccgaggcgggc
tacctggtggccaaggtggtggcggtggacggcgactcgggccagaacgcctggctgtcg
taccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaatggcgag
gtgcgcacggcgcggccgctgagcgagcgcgacgccgtcaagcacaggctgctggtgctg
gtccgggaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgttgctggtg
gacggcttctcgcagccctacctgccgctgccggacgcggcggcggccgaggcccgcgcc
gacccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcgctcttcctgttc
tcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcgtcggggggc
ggctgctcggtgcccgagggcccgtttccgggccacctggtggacgtcagcggcgcgggg
accctgtcccacagctaccagtatgacgtgtgtctgnngggagaatctgggaccagggaa
tttaagtttttgaagtttgttgtctccacccaacagaagcctgtgaaggatatggaggaa
aacnacaaatttgtgaatagttttggattcaattatgaatttcggttaaggaatttgggt
tctttcgaaatatga
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