Lutra lutra (Eurasian river otter): 125099974
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Entry
125099974 CDS
T08100
Name
(RefSeq) protocadherin beta-17-like isoform X1
KO
K16494
protocadherin beta
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125099974
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125099974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125099974
NCBI-ProteinID:
XP_047585614
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Position
5:79691309..79697922
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AA seq
812 aa
AA seq
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MESPLPKAPQKRQVTAIIILILLILWEVGSTTIKYSVLEERESGSFVTNLAKDLGLGLGE
LAVRAARILSKGNQQYLQLEQKSGNLLLKEKLDREELCGDTDPCVLHFQVLLKSPVRFIQ
GELQLQDVNDHAPEFLENEILLKISESSHPGTAFPLKIAQDLDVGSNTVQNYIISTNSHF
HLFTRNHSDGRRYPELVLDKALDREEQSELRLTLTALDGGSPPRTGTSQVLILILDINDN
TPEFAQLLYEVQMPENSPIGSLVITVTARDLDAGTHGELSYSFFQSSNQVIQAFEINSVT
GEIRLKKMLDFEEIQSYRMEIEASDGGGLSGKCSIAVEVMDVNDNTPELTMSVFTSDIPE
NTPDTVVAIFGISDPDSGENGKTKCSIQEHLPFVLKPSVENFYTLVTETPLDRESQAEYN
ITITVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTTYTLRVRENNSPALHIGSVSATDR
DSGANAQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFETLQAFEFRVGAADRGS
PALSSQALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQ
NAWLSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAVQHRLLVLVRDHGEPPLSASVTL
HVLLVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSR
AASGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVALLAKKRGKSRTKDVTNYNAQRKSW
PDKKSRGKETLVMGLGKSGTPPHDHCYYPAHF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaccgctacccaaagcgccacagaaaaggcaagtgaccgccattattatccta
atactgttaatactgtgggaagtggggagtacgaccattaagtattcggttctagaggag
agggaaagcggctcctttgtgaccaacctcgcaaaagatctggggcttggcttaggggag
ctggccgtgcgggctgctcgaattctttccaaagggaatcaacagtatttgcagctggag
cagaagagtgggaatttgctgttaaaagaaaaattggaccgggaagagttgtgcggtgac
acagatccatgtgtactgcatttccaggtgttactaaaaagcccagtgcggtttattcaa
ggtgaactacagctacaagatgtaaatgaccatgctccagaattcctggaaaatgaaatc
ctcctgaaaatatcagaaagcagtcatccagggactgcatttcctttgaaaatagctcaa
gatttagacgtgggcagtaacacagttcagaactacatcattagcaccaactcccatttt
caccttttcactcgaaatcacagcgatggcaggagataccctgagctggtgctggacaaa
gcgctggaccgggaggagcagtcagagctcaggttaacgctcacggccctggatggtggg
tcaccgcctcggactgggacttctcaggttctcatcttaatcttggacataaatgataat
actcctgaatttgcccagctgctctatgaggtgcaaatgccagaaaacagccctataggc
tcccttgtcatcactgtgactgctagagatttagatgctgggacccacggagaactctcc
tactcatttttccaatcctcaaatcaagtgattcaggcctttgaaataaactcagtcaca
ggggaaattcgattaaaaaaaatgttggattttgaagaaattcaatcttatcgtatggaa
attgaggcctcagatggcgggggactatcaggaaaatgctctatagccgtagaagtgatg
gatgtaaacgacaacactccggaactgactatgtcagtattcaccagtgatatcccggaa
aacacccctgacacggtggtggctatctttggaatttcagatccagactccggggaaaat
ggcaaaacgaagtgttccatccaagaacatctccccttcgtcctgaagccatcggtagag
aatttctacaccttggtaacagagacacccctagacagagagagccaggccgagtacaac
atcaccatcaccgtcaccgacctggggacccccaggctgaaaactcagcacaacctaacg
gtgacggtgtccgacgtcaacgacaacgccccgaccttcagccagacgacctacaccctg
cgcgtccgcgagaacaacagccccgcgctgcacatcggcagcgtgagcgccaccgacaga
gactcgggcgccaacgcccaggtcacctactcgctgctgccgccccacgacccgcagctg
ccgctgggctcgctggtgtccatcaacgcggacaacgggcagctgttcgcactcaggtcg
ctggatttcgagacgctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcg
ccggcgctcagcagccaggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcg
cccttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgg
gcggccgaggcgggctacctggtggccaaggtggtggcggtggacggcgactcgggccag
aacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgg
gcgcacaacggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgccgtccagcac
aggctgctggtgctggtccgggaccacggcgagccgccgctgtcggccagcgtcacgctg
cacgtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgcggcggcg
gccgaggcccgcgccgacccgctcaccgtctacctggtggtggccttggcgtccgtgtcg
tcgctcttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgg
gcggcgtcggggggcggctgctcggtgcccgagggcccgtttccgggccacctggtggac
gtcagcggcgcggggaccctgtcccacagctaccagtatgaggtggcgctgctggctaaa
aagagggggaaatcccgcacaaaggacgttacaaattacaatgctcagaggaaaagctgg
ccagacaagaaaagtagaggaaaggagacgctggtgatggggttggggaaaagtgggact
cctccccacgaccattgctattatccagctcatttctaa
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