Lutra lutra (Eurasian river otter): 125100083
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Entry
125100083 CDS
T08100
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
125100083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125100083
Membrane trafficking [BR:
llv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125100083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
PH_13
SOS1_NGEF_PH
PHD
Motif
Other DBs
NCBI-GeneID:
125100083
NCBI-ProteinID:
XP_047585867
LinkDB
All DBs
Position
5:101195906..101510580
Genome browser
AA seq
1846 aa
AA seq
DB search
MRRPGGEQAVIQWQPAGAERAGAAGAAGAAGRLRERARGSAPSALAPALRPPGVGSFGES
LPGPGRRRRQRTWARSRRPRAGRGAQRLAGVPEAVGALAPGELMKLSGVLLTFTLRGEIS
LGGLFLVPSYCELAEWNDSDAEAMELSCDEVPLYGQKTVHAKFGKNVYLPKDAEFYFIYN
GSHQRHIVIAERAEDNVLRSSIPGHGLQETVTVSVCLCSEGYSPVTMGSGSVTYVDTMAC
RLARLLVTQADRLTADSHQTLLTPFALTVGALPALDEEFVLALTHLELPLEWTVLGISSL
EVSLCRESLLHLAMRWGLPKLSHFLLCLPGGVQALSLPNEEGATPLDLALQAGHSKLVED
ITNFQGRRSPGFSRVQLSEQAFLQYLHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAF
LLKTLEDQEARPEERRDKPSSAAETEEGIKNSATSRSSPEKENVKHMENLVVQPNEHGDR
DHLDSDHSSDVFKKSKHSPTFFAAGRLSEVLNGGDEVYANCMVTDQVGDLDINYVNIEGI
MTDMCPESMGSTLGPQNCKHILDAENSHGKCPLNENKEVTSNTEAQQSFPSPSSSYASKY
NLSFGHRGFEKEQSHLKKRSSSLDALDANSEGEGRSEPARICYTPVSQSSSRTGIPSGDE
LDSFETTTEPDFSISRTESLSLSSNLLLKESLLSGVRSRSYSCSSPKISLGKTRLVRDFT
VCSSSEEQRAYSLPEPPREKRIQEEEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNK
SKTKSKDAKDKEKLSRHQFVPGTFSGVLQCSVCDKTLLGKESFQCSNCNANVHKGCKDAA
PPCTKKFQEKYKNKPQTILGNSSFRDIPQPGLSLHPSSSMPIGLPTRRKEASAQAHPLSR
SVPGTTLESFRRSGPSLESESDGNTWRSRSHSDELLQSMGSSPSTESFLMEDVVDSSLWS
DLSSDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLLIMSEIFRK
GMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCAGDDRNFIINRIGDILVQ
QFSEENANQMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECIL
LVTQRITKYPVLVERILQYTKERSEEHKDLCKALGLIKDMIASVDLKVSEYEKNQKWLEI
LNKIENKTYTKLKNGNVFRKQALISKERTLLHEGLVYWKTATGRFKDILALLLTDVLLFL
QEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERN
NWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTCLEEKL
HIYAELGELSGLEDVHLEPHLLIKPDPGDPPQAASLLAAALKEAESLQVAVKASQAGDAC
QSSEEGSGESSLTDTQSPPEEPGSSPASLVTEGTGGRGCWDVDPGTQGLGTDLAVSDAGE
KVEYRSFPVSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIQVHRLLLQQQESLSPGPSFR
GSPFQDQEKYRNLEKQREELANIHKLQSQFQQDQRRWHRQCDQQQREQEAKASRLQERER
ECWSQEELLLRTRGELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHGRQS
SLPAAFSPGSTEVMELNRSESLCHENSFFINEALVQVSLNTYNQSTLAGVHQDATYPQNI
ANSDLVRTSENQVDLQLDVSQPLDVNHELWTAAGSCHQISPLHPSSKDSCKNDLDNSQTE
FPTPHDSNPPGSQLQTFVAEAKLNLQTLTRQDGETGDGAEENIVYL
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcccggaggtgagcaggcggtgatccagtggcagccggcaggcgcggagcga
gcgggggcggccggagctgcaggcgcagcgggcaggctccgggagcgcgcccgcggctcc
gccccctccgccttggccccagccttgcggccgccgggcgttggcagcttcggcgagagc
cttcccggccctgggcggcggcggcggcagcggacctgggcgcgttccagacgccctcgg
gcagggcgcggggcgcagcgcctcgctggggttccggaggcagtgggggccctagctcca
ggtgaattaatgaaactttctggggttcttctgacctttaccctgcgtggtgaaatctct
ttggggggattgtttttggtaccaagctactgtgaactggcagagtggaatgactcagat
gcagaagccatggagttgagctgcgacgaagtacctctttatgggcagaagaccgtccat
gcaaagttcggcaaaaatgtgtatcttcctaaagatgccgagttttactttatttacaat
ggatctcatcagagacacatcgtgattgccgaacgcgctgaggataatgttctccggtct
agcattccaggccatgggcttcaggagacggtgacggtgtctgtgtgcctctgctcagaa
ggttactccccagtgaccatgggctccggctcagtgacttacgtggacaccatggcttgc
cggctggctcgtttgctggtcacccaagctgatcgcctcacagctgatagtcatcagacc
ttgctgactccatttgccctgacggtgggagccctgcctgccctggacgaagagttcgtg
ctggctctgacccatctggagttgcctcttgagtggacggtgttgggaatttcttcactt
gaagtttctttatgcagagagtctcttctacacctggctatgagatggggcctacctaag
ctctctcatttcctcttgtgcctccctgggggagttcaggctttgtctttacccaacgaa
gaaggtgccacaccattagacttagctttgcaagctggacactccaagctggttgaagac
atcacaaatttccagggcagacgttccccaggcttctccagagtgcagctcagtgaacaa
gctttcctgcagtatcttcactcatcagagactttgaccctgacactgaaccacacagcc
gagcatttgttggaggcagatattaaactcttcaggaaatacttctgggacagagccttt
ctcctcaagactcttgaagatcaagaagccaggccagaggaaagacgagacaaaccatcc
agtgctgcagaaactgaagaagggattaagaattcggcaaccagcagatcatcacctgaa
aaggagaatgtaaagcacatggaaaacctggtggttcaaccaaatgaacacggagaccgg
gaccatctagattcagatcactcttctgatgtcttcaaaaaatccaagcattccccaaca
ttctttgcagcaggccggctctctgaggtgctgaatggtggcgatgaagtttacgctaat
tgtatggtgacagatcaggttggtgatttggatattaactatgttaatatagaaggaatc
atgacagacatgtgccctgaatccatgggttctactctggggcctcagaactgcaagcat
atccttgatgctgaaaacagccatggaaaatgcccactaaatgagaacaaggaagtgacc
tcaaatactgaagctcagcagtccttcccatcaccatctagttcatatgcttccaagtat
aatctttcctttggtcatcgtggatttgaaaaggaacaaagtcatctgaagaaaagaagt
tctagcctcgatgccctggacgccaacagtgaaggggaagggcgctctgagccagcacgc
atttgctacactccagtgtctcagagctcctccagaactggaattcctagtggggatgag
ctggactcttttgagaccaccacggaaccagatttcagtatctccaggacagagtcgctt
tctttatcaagtaacctgctgttgaaggaatccttgctttctggagtccgctcacgttct
tactcctgctcatcacccaaaatttctttaggaaaaactcggttggtgcgtgattttaca
gtgtgcagttctagtgaagagcaaagagcttacagcctaccggagccaccaagagaaaaa
agaattcaggaagaagaatgggataaatacattatacctgctaagtcagagtctgaaaaa
tacaaagtgagccgaacattcagcttcctcatgaataggatgacaagccctcggaataaa
tctaagacaaaaagcaaggatgccaaagacaaagagaagctgagccgacatcagtttgtc
cctggaacattctctggggttctacagtgttcggtttgtgacaaaacgctcctggggaag
gagtcattccagtgttccaactgtaatgcaaatgtacacaagggttgtaaagatgctgcc
cctccgtgtaccaagaaattccaagagaaatacaagaacaaaccgcagaccatccttgga
aactcttcctttcgtgacatcccgcaacctggtctctccttgcacccttcttcttccatg
cctatcggattgcccaccaggaggaaagaagcttcagcacaggcccatccattgtctaga
agtgttccaggcactaccttggaaagcttcagaaggtcggggccctccctggaatctgag
agtgacgggaacacctggagaagcaggtctcattctgatgagctgctacagtccatgggc
tcttctccctccacagagtccttcctaatggaagatgttgtggattcttctctgtggagt
gacctcagcagtgacgcccaggagttggaagcagagtcttggagtctggtggtggacccc
tcattttgcagtaagcaggagaaagatgtcattaaaagacaggatgtcattttcgaactg
atgcaaacagagatgcatcatatccagaccctgctcatcatgtctgagatcttcaggaaa
ggaatgaaggaggagctgcagcttgatcacagcaccgtggataaaatcttcccctgctta
gatgagttactggaaatccataggcatttcttttatagcatgaaggagcgaaggcaggag
tcctgtgctggtgatgacaggaatttcatcatcaaccgaattggagatattctagtacag
cagttttcagaagaaaatgcaaatcaaatgaagaaaatatatggagaattctgtagccat
cacaaagaagctgtcagcctctttaaagaactccaacaaaataaaaagtttcagaatttt
attaagcttcgaaatagtaatcttctggctcgacgccgaggaatcccagaatgcattctg
ctagtcactcagcgcatcacaaagtacccagtcctcgtggaaaggattttgcagtacaca
aaggaaagaagtgaagaacataaagacttgtgcaaagctctgggcttaattaaagacatg
attgcgtcagtggatttaaaagtcagcgagtatgagaaaaaccaaaaatggctggagatc
ctaaataagatcgaaaacaaaacctacacaaagctcaaaaacggcaatgtgtttaggaag
caagcactgataagtaaagaaaggactctcttacatgaaggccttgtttactggaaaact
gcgacaggtcgattcaaagatatcctggctctacttctaactgatgtgctgctcttttta
caagaaaaagaccagaaatacatctttgcagctgttgaccagaagccatcggttatttcc
cttcagaagcttattgctagagaagttgcgaatgaggaaagaggcatgtttctaatcagt
gcctcctccgctggtcctgagatgtacgaaattcacaccaactccaaggaggaacgaaat
aactggatgagacgaatccaacaggcagtagagagttgcccagaagaagaagggggaagg
acaagtgaatctgatgaagagaggcggaaagctgaagcaagagtggccaaaattcagcaa
tgtcaagaaatactcagtaaccaagaccaacaaatttgcacatgtttggaggagaagctg
catatctatgctgaacttggagaattgagtggattggaggatgtccatctagagccccac
ctcctcattaaacctgatccaggagatcctccccaggcagcctcattactagcagcagcg
ctgaaagaggctgagagcctccaagttgcagtgaaggcctcacaagcgggcgatgcctgt
cagtcatccgaggaaggttctggagaatcttccttgacggatactcagagtccccccgaa
gagccaggatcatctccagcttcactagtcacagaagggacaggaggaagaggctgttgg
gatgtggatcctggcacccagggtttgggaaccgacttggcagtctctgatgcaggggag
aaggtggaatatagaagtttccccgtttcttcacagtcagagattatacaagcgatacag
aacttaacccgtctcctctatagccttcaggccgccttgaccatccaggacagccacatc
caggtccacaggctgctcctccagcagcaggagagcctctcccctggcccgtccttccga
gggagccccttccaggaccaggagaagtaccgcaacctagagaagcagcgggaagagcta
gccaacatccacaagctgcagtcccagttccagcaggaccagcggcgctggcaccgccag
tgtgaccagcagcagcgggagcaggaggccaaggccagccggctgcaggagcgcgagagg
gagtgctggtcacaggaggagctgttgctcaggacccgcggggagctggaccagcagctc
caggagtaccaacagaacctggagcggctgagggagggccagcgcctggtggagagggag
agggagaggatgcgggcccagcagagcctgctgtgtggttggaaacacgggcggcagagt
agccttcccgcggcgttttctccgggaagcacagaggtaatggaacttaatcgatccgag
agtttgtgtcatgaaaattcattcttcattaatgaagctttagtacaagtgtcacttaac
acttacaaccaatcgactctagcaggtgtccatcaggatgccacttatccccagaatata
gctaattctgatttggtaaggactagtgaaaatcaagtagacctccagttggacgtttct
cagcccttggatgtcaaccatgaactatggacagccgctgggtcctgtcatcagatatcc
cctctccacccaagcagcaaggattcttgtaaaaatgatttggataactctcagactgag
ttcccaaccccccatgactccaatccacctggctctcagctgcagacgtttgtggcagaa
gcaaagctaaatctacagacactgaccagacaagatggggaaactggagatggagctgaa
gaaaatattgtttacctctaa
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