Lutra lutra (Eurasian river otter): 125100091
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Entry
125100091 CDS
T08100
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125100091
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Protocadherins
125100091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125100091
NCBI-ProteinID:
XP_047585899
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Position
5:79670435..79673481
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AA seq
795 aa
AA seq
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METALAKTPQKRQVIFLAILLLLWEAGSDAIRYSMPEETESGSFVANLAKDLGLRVGELV
TRGARIHYKGNKQVLQLDIETGNLLLYEKLDREVLCGVTDPCILYFQLLLENPVQFFQAE
LQLTDINDHSPEFLDKEMLLKIPESVQPGTIFPLKIAQDLDIGINTVQNYTISPNSHFHV
VTRNGGDGRKYPELVLGKSLDREEQSELSLTLTALDGGTPPRSGTTAVRIEVVDINDNAP
QFLQSLYEVQVPENSPLNSLVVAVSAQDLDAGTYGNVVYTLFQGDEVAQPFVIDEITGEI
RLKKALDFEATRYYTVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSSTPENSP
ETVVAVFSVSDPDSGDNGRVVCSIQNDLPFLLKPTFKNFYTLVTERPLDRESQAEYNITI
TVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTSYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPHDPQLPLGSLVSINADNGQLFALRSLDFEALQAFEFRVGAADRGSPAL
SSQALVRVLVADANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVAKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAVQHRLLVLVRDHGEPPLSASVTLHVL
LVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAAS
GGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLRGGSETGDFKFLKPIIPKFTSNGAGE
EIEGNATFRNSFGFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcactagcaaaaacgccacagaaaaggcaagttatctttcttgctatattg
ttgcttttgtgggaggctggctctgatgcaattaggtattccatgccagaagaaacagaa
agtggctcctttgtggccaacctggcaaaagacctggggctcagggttggggagctagtt
actcggggtgcgcgaatccattacaaaggaaacaaacaggtcctgcagctggatatagaa
accgggaatttgctgctgtatgaaaaactagaccgggaggtgctgtgtggggtgacagat
ccctgtatactctatttccagttattactggaaaacccagtgcagttttttcaggctgag
ctgcagcttacggatataaatgaccattccccagaattcctagacaaggaaatgctccta
aaaatcccagagagcgttcaaccagggaccatatttcctttgaaaatagctcaggacttg
gacataggtatcaacactgtgcagaactacacaatcagccccaactcccattttcacgtt
gtcactcgtaatggcggagatggccgaaaatacccagagctcgtgctgggcaaatccctg
gatcgggaggagcagtctgagctcagtttaactctcacagcactggatggtgggactccg
cccaggtctgggaccactgcagtccgtattgaagtcgtggacatcaatgataatgcccct
cagtttttacagtcactgtatgaggtacaggtccctgaaaacagccccctaaactccttg
gttgtcgctgtctctgcccaagatttagatgcaggaacatatgggaatgtagtctacact
ctcttccaaggcgatgaagttgctcaaccatttgtaatagatgaaattacaggagaaatt
cgtctgaaaaaagcattggatttcgaggcaactcgatactatactgtggaaattgcaggc
acagacggcggggggctttcaggaaagtgtactgtagctatagaggttgtggatgtgaat
gacaatgcccctgaacttaccatgtcgacgctctcaagctctaccccagaaaactcacca
gagaccgtagtggctgttttcagtgtttctgatccagattcgggggacaacggtagggtg
gtttgctccatccagaacgatctcccctttctcctgaaacctacgttcaagaacttctac
acactagttacggagagaccactggacagagagagccaggccgagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacctaacggtgacggtg
tccgacgtcaacgacaacgccccgaccttcagccagacgtcctacaccctgcgcgtccgc
gagaacaacagccccgcgctgcacatcggcagcgtgagcgccaccgacagagactcgggc
gccaacgcccaggtcacctactcgctgctgccgccccacgacccgcagctgccgctgggc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtcgctggatttc
gaggcgctgcaggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctc
agcagccaggcgctggtgcgcgtgctggtggcggacgccaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtggccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgccgtccagcacaggctgctg
gtgctggtccgggaccacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgcggcggcggccgaggcc
cgcgccgacccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcgtcg
gggggcggctgctcggtgcccgagggtccgtttccgggccacctggtggacgtcagcggc
gcggggaccctgtctcacagctaccagtatgaggtgtgtctgaggggaggatctgagacc
ggcgacttcaagtttttgaagccaattattcccaaatttacatcgaatggcgctggcgaa
gaaatagagggaaatgccaccttccggaatagctttggattcagttag
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