Lutra lutra (Eurasian river otter): 125100094
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Entry
125100094 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125100094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125100094
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125100094
Spliceosome [BR:
llv03041
]
Complex A
U2 snRNP components
U2 related factors
125100094
Complex B
125100094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
125100094
NCBI-ProteinID:
XP_047585902
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All DBs
Position
5:74050058..74125749
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgccactatcggaagcgatcagcatcaagggggcgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgatagacgttct
agaagcagagatagagataggaggagagagaggtctcgaagcagagataaaagaagatct
cggtcaagagaccggaagcgcctgaggcgttccagaagtagagagagagagagaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgctcgaggagtagaagccgaggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagctgagaataggtctaggtcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaagatgaaaaagaaaaagatgctggcaactttgatcagaataagctggaagaagaaatg
agaaagcgaaaagagagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaagaaattgaagagatgaaacaagggaaaaaatggagctta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtaaaagaggaagtaaag
aagtttaatatgagaagtgtgaaaggtggtggaggaaatgaaaagaagtctgggccaaca
gtcacaaaagttgtcactgtagtgacaaccaaaaaagcagtggtagattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaagaggaagaa
gttgatcttcagacagctcttacaggatatcagacaaaacagagaaagcttctagaacca
gtggaccatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattagcaaaaatgtctcaagaggaggtcaatgtatttcggttggaaatggagggcatt
actgtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattctctcaaaaagcatggctatgaaaagcccacgccaatccaaact
caggcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcttttctcttacccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccctgggacttagagtggtgtgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cggagagtgacatacgtggttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtaatgcgcattgtggataatgtccgtcctgatcgacagacagttatgttttca
gctacttttcccagagctatggaggctttggctcgccgaatcttgagtaaacccattgaa
gtgcaagttggaggcagaagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttcttggccattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttctcgtagctacatctgttgctgct
cggggtctagacgtgaaacatctgattcttgtagtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaataaaggttatgcatat
acttttatcacagaagatcaagctcgctatgccggtgacataattaaagctcttgaattg
tcgggaactgcagtgcctcctgatctggagaaactttggagtgatttcaaagatcagcag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgagacagaacaagctttggctaatgagaggaaaaagttgcaaaaagcggctctcggt
ctgcaagattcagatgatgaggacgctgcagttgacattgatgaacaaattgaaagtatg
tttaattcaaagaagagagttaaagatatggctgctcctggaacatccagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaatgca
attctcagaggtggcaccatcctggctcccactgtgtctgccaaaaccattgcagagcaa
cttgctgaaaagattaatgccaagctcaattatgtgcctttggagaaacaagaagaggag
agacaggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctaggtggaaggttacctctaaggaagctctgcagagaatcagt
gaatattctgaagctgcaattacaatcagaggaacatatttcccacctggaaaagaacct
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaggcagaaatcaccaggcttataaaagaagaactgattcggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
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