Lutra lutra (Eurasian river otter): 125100100
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Entry
125100100 CDS
T08100
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03272
Virion - Hepatitis viruses
llv04382
Cornified envelope formation
llv04514
Cell adhesion molecule (CAM) interaction
llv04530
Tight junction
llv04670
Leukocyte transendothelial migration
llv05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125100100
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125100100
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125100100
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125100100
09158 Development and regeneration
04382 Cornified envelope formation
125100100
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
125100100
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125100100
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125100100
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Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Laminin_II
HBM
FKBP15
FapA
APG6_N
DUF4164
KxDL
GAS
Swi5
DUF7307
TMF_TATA_bd
PAZ_3
TadF
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
125100100
NCBI-ProteinID:
XP_047585913
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All DBs
Position
5:99061525..99127920
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AA seq
521 aa
AA seq
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MSSRPFESPPPYRPDEFKPNHYAPSNDVYGGDMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGTGLLGGGLGYPYSSGFGSYGGGYAYG
YSYGYGYGGYTDPRAAKGFLLAMAAFCFIAALVVFVTSVIRSDISRTRRYYLTVIILSAI
LGVMMFIATIVYIMGVNPTAQASGSIYSSQIYALCNQYYASMTTGIYMDQYLYHYCVVDP
QEAIAIVLGFMVIVAFALIIFFAVKTRGKMDRYDKSNILWDKEHIYDEQPPNVEEWVKNV
SAGTQDMPPPPSDYVERVDSPVAYSSNGKVNDKRPYPESSYKSTPVPEVVQELPVTSPMD
DFRQPRYSSSSNFETPSRRAPTKGRAGRSKRPEQDHYETDYTTGGESCDELEEDWIREYP
PITSDQQRQQYKRNFDTGLQEYKSLQAELDEVNKELSRLDKELDDYREESEEYMAAADEY
NRLKQVKGSADYKNKRNYCKQLKSKLSHIKKMVGDYDRQKT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacggccttttgaaagtccacctccgtatagacctgatgaattcaaacccaat
cattatgcaccaagcaatgatgtctatggtggagacatgcacgtccgacccatgctctct
cagccggcatactctttctacccagaagatgaaattcttcacttctacaaatggacctct
cctccaggagtcattcggattctgtctatgctcattattgtgatgtgcattgccatattt
gcctgtgttgcctccacacttgcctgggatcgaggctatggaactggcttactgggtggc
ggtctaggctacccttacagcagtggctttggtagctacggaggtggctatgcatatggt
tatagctatggttatggctatggaggctacaccgatccaagagcagcaaagggcttcctc
ctggccatggcggccttttgtttcattgctgcattggtggtatttgttaccagcgttata
cgatctgacatatctaggacaagaagatactacttgactgtcataatactgagtgctatc
ctgggtgtcatgatgtttatcgccaccattgtctacataatgggagtcaacccaactgcc
caggcttctgggtctatatacagttcacagatatatgccctctgcaaccagtattatgcg
tctatgactactgggatctacatggatcagtatttgtatcactactgtgtggtggatccc
caagaggcaattgccattgtactggggttcatggttattgtggcttttgctttaataatt
ttctttgccgtgaaaacccgaggaaagatggatcgatatgacaagtcgaatattttgtgg
gacaaggaacatatttatgatgaacaaccccccaatgtcgaagagtgggttaaaaacgtt
tctgcaggcacacaggacatgcctcctcccccttctgactatgtggagagagtggacagt
cccgtggcctactcttctaacggtaaagtgaatgacaagaggccctatccggagtcttcc
tacaaatcaacaccggtgccggaagtggtgcaggagctgccagtgacctcgcccatggat
gacttcaggcagcctcgatacagcagcagcagcaacttcgagacaccttccagaagggcc
cccacgaaaggaagagcaggcaggtccaagcggccggagcaggaccactatgaaacagac
tacaccactggcggcgagtcgtgcgatgagctggaggaggactggatcagggaatatcca
cctattacttcagatcaacaaagacaacagtacaagagaaattttgacactggcctgcag
gaatataagagcttacaagcagaactcgatgaggtcaataaagaactctctcgtctggat
aaagaattggatgactatagagaagaaagtgaagagtacatggctgctgctgatgagtac
aatagactgaagcaagttaagggatctgcagattacaaaaataagaggaattattgcaag
cagctgaagagcaaattgtcacacatcaagaagatggtgggagattatgacagacagaaa
acatag
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