Lutra lutra (Eurasian river otter): 125100737
Help
Entry
125100737 CDS
T08100
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05012
Parkinson disease
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
125100737
05022 Pathways of neurodegeneration - multiple diseases
125100737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
MCD1
Motif
Other DBs
NCBI-GeneID:
125100737
NCBI-ProteinID:
XP_047587090
LinkDB
All DBs
Position
5:complement(140049079..140208282)
Genome browser
AA seq
966 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQSEDRSVSSSGWNCSVSALITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKVEYQKGGDSDPGPQSEELS
PGDGDSGPQSKSTEPSTLLGELEHYDLDMDEILDVPYIKSSQQLASYTKVTPEKRILGLC
STINGLSGKACSPGSAESSPANTTPFCVLSPVKSPQLRKALSVVRDQQKLSAEESENSPA
LVKCGSAYEPENQNKDFFNKTFNDAPGRKREKAVTDCQLRAFHLQSAATEPKLEEPIGSG
NWTSSQGPEERSEHLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHVAASQG
HAECLQHLTSLMGEDCLSERNAEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFP
SLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGFLGCIQTLVEYGA
NVTMQNHAGEKPSQSAEHHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQN
QLQQLLEAQKSESLLSSPSSPSSPASRRSQWKSPDADDESVAKSKPGVQEGIQVLGSLSA
SSRARVKAKDEDSDKILRQLLGKDISESVCTQEKLSLEFQDAQASSRNSKKIPVEKRELK
LARLRQLMQRSLSESDTDSNTSEDPKSTPVRKADRPRPQPIVGCMESVDSAESLHLMIKK
HTLTSGRRFPFGIKASKSLDGHSPSPTSESSEPDLESQCPGTGTTPPSQPSGDPTQLSPD
STVAQKVAMSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQSSLELNGEKERDKGRTL
QRASMSSELGDQLKRPFGTFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTTDA
KGNPVSSAGKGKNKAEMYGSCITLSSNTLTEEPQRNRARHNDINRKMKKSYSIKHNAEPE
SKELFL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcccgaataccttgacttggatgagattgacttcagtgacgatatatcctac
tcagtcacgtcactgaagaccatcccagaactgtgcagaagatgtgactcgcagagcgaa
gacagatcagtttcgagctccggctggaattgcagcgtgtcggccctcattacaaacacg
cagaagcccacgggaatcgccgacgtgtacagtaagttccgtcccgtgaagcgagtttcc
ccgctaaagcaccagccagagactctggagaacaacgaaagcgatgaccagaagaaccag
aaggtggagtaccagaaagggggtgattccgacccaggtccccaatccgaagagctcagc
cctggagatggagacagcggtccccaaagtaagagcaccgagcccagcaccttgctggga
gaactggagcactatgaccttgacatggatgagattctggatgtgccttacattaaatcc
agtcagcagcttgcctcttacaccaaggtgactccagagaagagaattttgggtttgtgc
agcaccatcaatggcctttctggcaaagcctgctctcctggcagtgctgagagctctcca
gccaacacgaccccgttctgtgttctttcacctgtgaaaagccctcagctgagaaaagcg
ttgtccgtcgtccgcgaccagcaaaagctctctgctgaagagtctgagaactcaccagca
ctggtgaagtgtggctccgcctatgagcccgagaaccagaataaggacttcttcaacaag
acctttaatgatgctccaggtcgaaaacgtgagaaggcagtgacagactgtcagctcagg
gccttccatctgcagtccgcagccacggaacccaaactagaagagcccatcgggagtggg
aactggaccagctcccagggtccggaagaaaggagtgagcatctgaaaaaagtgaaaagc
atcttgaacattgttaaggaaggacagatctctctcctgccacacctcgctgccgacaac
ctagacaaaattcacgatgaaaatggcaacaatctcttacatgtggccgcgtcgcaggga
cacgccgagtgtctgcagcacctcacctctttgatgggagaagactgcctcagtgagcga
aacgcagagaagctgactccagcgggcctggccatcaagaatggtcagttggagtgcgtc
cgttggatggtgagtgaaacagaagccatcgcagagctgagttgttctaaggatttccca
agccttattcattatgcaggttgctttggccaggaaaaaattcttctttggcttcttcag
tttatgcaagaacagggcatctccctggatgaagtggaccaagatggcaacagcgccgtc
cacgtagcctcccagcacggcttcctcgggtgcatccagacattggttgaatatggagca
aatgtcaccatgcagaaccacgcaggggaaaagccatcccagagcgccgagcaccatggg
cacacgctgtgctcccgatacctggtggtggtggagacctgcatgtcgctggcgtctcag
gtggtgaagctaaccaaacagctgaaggaacagacagtggaacgtgtcacattgcaaaac
cagctccagcaacttctagaagcccagaaatcagagtcactcctttcttcgcccagttca
ccatcctccccggcttccagaaggtcccagtggaaatctccagatgcagatgatgagtct
gtagccaaaagcaaacctggagtccaagaggggattcaggttctcggaagcctgtctgca
tccagccgggccagggtcaaagcaaaagacgaagattctgacaaaatcctacgccagtta
ctgggaaaggatatctcagagagcgtctgcacccaggaaaagctgtccttggaattccaa
gatgcccaggcttcctctagaaactccaagaagatccctgtggagaagagggaactgaag
ttagctcggctgaggcagctgatgcagcggtccctgagtgagtccgacaccgattccaac
acctctgaggaccccaagagcacacctgtaaggaaggccgacaggccccggccgcagccc
attgtgggatgtatggagagcgtggacagcgcagaaagcttacacctgatgataaagaaa
cacaccttgacatcaggacgtaggtttccttttggcatcaaggcctccaaatctctggat
ggccatagcccatcccccacctcagagagcagcgaacctgacttggaatcccagtgtccc
ggaacagggaccactcccccaagccagccctctggagaccccactcagctcagccctgac
agcaccgttgcccagaaagtggctatgagccccaagagtgccctcaagtctccatcttcc
aagcgccggacctcccagaacttgaaactcagagttacctttgaggagcctgtggtacag
atggaacaaagtagccttgagctaaatggagagaaggagagagataaaggcaggaccctc
cagagggcctccatgagtagtgaattgggggaccaactgaaaaggccttttggaaccttc
cggtctatcatggagacactcagcggcaaccagaacaataataataactaccaggcagcc
aatcagctgaagacgtccacactgcccttaacctcacttggcaggaagacaacagatgcc
aagggaaatcccgtgagctctgctggcaaaggaaagaataaggcggagatgtacggcagc
tgcatcaccctttcttctaacacgctgactgaagagcctcagcgtaaccgcgcacggcat
aatgacatcaatagaaaaatgaagaaatcctacagcataaagcacaatgctgagccagag
tcaaaagaactcttcttgtaa
DBGET
integrated database retrieval system