Lutra lutra (Eurasian river otter): 125100740
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Entry
125100740 CDS
T08100
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04144
Endocytosis
llv04530
Tight junction
llv04666
Fc gamma R-mediated phagocytosis
llv04810
Regulation of actin cytoskeleton
llv05100
Bacterial invasion of epithelial cells
llv05132
Salmonella infection
llv05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125100740
09144 Cellular community - eukaryotes
04530 Tight junction
125100740
09142 Cell motility
04810 Regulation of actin cytoskeleton
125100740
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
125100740
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125100740
05135 Yersinia infection
125100740
05100 Bacterial invasion of epithelial cells
125100740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125100740
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125100740
Membrane trafficking [BR:
llv04131
]
Others
Actin-binding proteins
Arp2/3 complex
125100740
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
125100740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Rax2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
125100740
NCBI-ProteinID:
XP_047587101
LinkDB
All DBs
Position
5:complement(29216778..29218397)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS
TLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccctacatcagtttttactagagccaatcacctgtcatgcctggaacagggatcgt
acccagattgctcttagccccaacaatcatgaagtccacatctataagaagaacgggagc
cagtgggtgaaagctcatgagctcaaggagcacaacggacacattacaggtatcgactgg
gctcccaagagtgaccgcatcgtcacttgtggggcagaccgcaatgcctacgtctggagt
cagaaagatggtgtctggaagccaaccctggtgatcctgagaattaatcgtgcagcgact
tttgtcaagtggtccccgctagagaacaaatttgctgtgggaagtggagcgcgactcatt
tctgtttgttactttgagtctgaaaatgactggtgggtaagcaagcacattaaaaagccc
attcgctccacggtcctcagcttggattggcatcccaacaacgtcttgctggccgcagga
tcctgcgatttcaaatgcagagtgttttctgcctacattaaagaagtggatgaaaagccc
gccagtacgccctggggcagcaagatgccttttggtcagctgatgtcagagtttgggggc
agtggcaccggtggctgggtgcatggggtcagcttctctgccagcgggagccgcctggcc
tgggtcagccacgacagcaccgtatccgttgctgacgcctcaaaaagcgtgcaggtctca
actctgaaaacagagttcctgcccctcctgagtgtgtcatttgtctcagagaatagcgtt
gtagctgcgggccatgactgctgcccaatgctctttaactacgatgaccgtggctgcttg
accttcgtctccaaactagacattccaaaacagagcattcagcgcaacatgtctgccatg
gaacgcttccgcaacatggacaagagggccacaaccgaggaccgcaacacagccttggag
acgctgcaccagaatagcatcactcaagtgtctatttatgaagtggacaagcaagattgt
cgcaaattttgcactactggcatcgatggagccatgaccatttgggatttcaagacctta
gagtcttccatccagggcctccggataatgtga
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