Lutra lutra (Eurasian river otter): 125100772
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Entry
125100772 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125100772
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125100772
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125100772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125100772
NCBI-ProteinID:
XP_047587156
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All DBs
Position
5:86787084..86871772
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AA seq
730 aa
AA seq
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MGDEDWEAEIIKPHMSSYVPVFEKDRYSSGANGDTSNRTPASSSEMDDGPSRRDHFMRSG
FASGRSMGNRDAGESNKRENTSTMGGFGVGKSFGNRGFSNNKFEEGDSSDFWRESNNDCE
DNQTRSRGFSKRGGYQDGNDSEASGSSRRGGRGSFRGCRGGFGLGSPNSEYEQDEGTQRT
GGLFGSRRPALSGTGNGDTSQSRSGSGSGRGGYKGLNEEVVTGSGKNSWKSEAEGGESGD
TQGPKVTYIPPPPPEDEESIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQT
LNKNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITAS
RFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNI
LCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTL
MFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNI
GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS
VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGQAISFFDPESDNHLAQPLVK
VLSDAQQDVPAWLEEIAFSTYVPGFSGSSARGNVFASVDTRKNYQGKSTLNTAGFSSSQA
PNPVDDESWD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaataatcaaacctcatatgtcttcctatgttcct
gttttcgagaaggataggtattcttctggagcaaatggagacacttctaacaggactcca
gcttcatcatcagaaatggatgatggaccttctcgaagagatcatttcatgagaagcgga
tttgcctctgggaggagtatggggaacagagatgctggcgagtctaataaaagagagaat
acatccacaatgggtggttttggagttggaaagagttttggaaacagaggtttttcaaat
aacaagtttgaagaaggtgatagctctgatttctggagagaatctaataatgactgtgaa
gacaatcaaacacggagcagagggttttccaagagaggcggctatcaagatggaaatgat
tcagaagcttcagggtcatccagaagaggtggaagaggtagtttccgaggttgccgtgga
ggatttggtctaggaagtccaaatagtgaatatgaacaagatgagggaacacagcgcact
ggtggcctttttggttctagaagaccagcattaagtggcacaggtaatggtgacacttcc
caaagcagaagtggcagtggaagtggacgaggtggttacaaaggtttaaatgaagaagta
gtaacaggctctggaaaaaattcttggaagtcagaagctgaaggaggagaaagtggtgat
actcaaggaccaaaggtgacctatataccgcctcctccacctgaggatgaggagtccatc
tttgcacattatcagacaggcataaactttgacaaatatgatactattcttgtagaagta
tctggacatgatgcaccaccagcaattctgacttttgaggaagctaatctctgtcagaca
ctgaataaaaacattgctaaagctggttatactaagcttactcctgtgcaaaaatacagt
attcctattatattagcaggacgagatttgatggcttgtgctcagacagggtctggaaag
actgcagcttttctcttgccaattttggcacatatgatgcgtgatggaataacagccagt
cgttttaaagagctgcaggaaccagagtgcatcattgtagcaccaactcgagaactgatc
aatcagatctacctggaagccagaaagttttcttttgggacctgtgtaagagctgttgtt
atatatgggggaacccagttggggcattcaattcgacaaatagtacaaggttgtaatata
ttatgtgctactcctggaagactgatggatatcataggtaaagaaaagattggtctcaga
caagtcaaatatttagttctggatgaagctgatcgcatgctggatatgggttttggacca
gaaatgaagaagttaatttcttgccctggaatgccatcaaaagaacagcgtcaaaccctt
atgtttagtgcaacttttccagaagaaattcaaaggttggctgcggagtttttaaagtcg
aattatttgtttgttgctgttggacaagtgggtggagcatgtagagatgttcagcagaca
attctccaagttggccagtactccaaaagagaaaaacttgttgaaattctacgaaacata
ggtgatgaaagaactatggtttttgttgagactaagaaaaaagcagattttattgctact
tttctttgtcaagaaaaaatatcaacaacaagtattcatggtgaccgagaacagagagag
agagagcaagctcttggagattttcgctgtggaaagtgtccagttcttgttgctacttca
gtagctgccagggggctggatattgaaaatgttcaacatgttatcaattttgatcttcct
tctaccattgatgaatatgtacatcgaattggacgtactggtcgttgtggaaatactggc
caagctatttccttttttgatcctgaatcagataaccatttggcacagcctttagtgaaa
gtactgtcagatgcccaacaggatgttcctgcatggttggaagaaattgcctttagtaca
tatgttcctggcttcagtggtagtagtgcaagaggaaatgtgtttgcatcagttgacact
agaaagaattaccagggcaagagcactttgaacacagcagggttttcttcttcacaagct
cccaatccagtagatgatgagtcatgggattaa
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