Lutra lutra (Eurasian river otter): 125100801
Help
Entry
125100801 CDS
T08100
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125100801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
llv00536
]
125100801
Glycosaminoglycan binding proteins [BR:
llv00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125100801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
hEGF
Laminin_G_2
LRR_9
LRRNT
Laminin_G_1
LRRCT
EGF_TEN
LRR_14
LRR_EndoS
EGF_3
EGF_Teneurin
EGF_DL_JAG
LRR_NXF1-5
cEGF
Motif
Other DBs
NCBI-GeneID:
125100801
NCBI-ProteinID:
XP_047587194
LinkDB
All DBs
Position
5:complement(59206784..59802602)
Genome browser
AA seq
1522 aa
AA seq
DB search
MAPGRTGADAAVRARLALALALASVLSGPPVAACPTKCTCSAASVDCHGLGLRGVPRGIP
RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK
LQVLPELLFQSTPKLTRLDLSENQILGIPRKAFRGIANVKNLQLDNNHISCIEDGAFRAL
RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT
LCMAPVHLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTE
IPANLPEGIVEIRLEQNSIRSIPPGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL
VLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK
GLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCGSPRRLANKRIGQIKS
KKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN
DNEISVLEATGIFRKLPNLRKINLSNNKIKEVREGAFDGAAGLQELMLTGNRLETLHGRM
FQGLRSLRTLMLRSNLINCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL
LSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNDESSCQ
LGPHCPEQCACMETVVRCSNRGLHALPKGIPKDVTELYLEGNHLTAVPRELSALRHLTLI
DLSNNSIGVLTNYTFSNLSHLSTLILSYNRLRCLPIHAFDGLRSLRVLTLHGNDISSVPE
GSFRDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPT
HRFQCKGPVDINIAAKCNACLSSPCRNNGTCSQDPVELYRCTCPYGYKGKDCTVPINTCI
QNPCWHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVC
VCPPNYTGELCDEVIDHCVPGMNLCQHEAKCISLDKGFRCECLPGYSGKLCEVDNDDCVA
HRCRHGAQCVDAVNSYTCICPQGFSGLLCEQPPPMVLLQTSPCDQYECQNGAQCIVVQQE
PTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGD
NDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPK
SLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKA
LPPQALGVSPGCKSCTVCKHGLCHSVEKDSVVCECHPGWTGPLCDQEVRDPCLGHSCNHG
KCVPTGTSYVCKCAEGYSGATCDHKNDSNACSAFKCHQGQCHFSDRGEPFCLCQPGFSGE
HCEQENPCLGEVVREVIRRQKGYASCATASKVPIMECRGGCGPQCCQPTRSKRRKYVFQC
TDGSSFVEEVERHLECGCRPCS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgggcggacaggggccgacgccgcggtgcgcgcccgcctggcgctggccttg
gcgctggcgagcgtcctgagcgggcccccagtcgccgcctgccccaccaagtgtacctgc
tccgccgccagcgtggactgccacgggctgggcctccggggggttccccggggcataccc
cgcaacgccgaacgccttgacctggacagaaataacattaccaggatcaccaagatggac
ttcgctgggctcaagaacctccgggtcttgcatctggaagacaaccaggtcagcgtcatc
gagagaggcgccttccaggatttgaagcagctggagcgattgcgcctgaacaagaataag
ctccaggtcctcccggaattgctttttcagagtacaccgaagctcaccagactagatctg
agtgaaaaccagatcctggggatcccgaggaaggcgttccgtggcatcgccaacgtgaag
aacttgcaactggacaacaaccacatcagctgcattgaagatggagccttccgggcgctg
cgtgatctggagatcctcaccctcaacaacaacaacattagccgcatcctcgtcacgagc
ttcaaccacatgccgaagattcgaactctacgcctccactccaatcacctgtactgtgac
tgccacctggcctggctctcggattggctgcgacagcggcggacagttggccagttcaca
ctctgcatggctcctgtgcacctgaggggcttcaacgtggcagatgtgcaaaagaaggag
tacgtgtgtccaggcccgcactcagaacctccatcctgcaatgccaactccatctcctgc
ccctcagcctgcacttgcagtaataacatcgtggactgtcgagggaagggcttgactgag
atccccgccaacttgccagagggcatcgtcgaaatacgcctggaacagaactccatcaga
tccatcccccctggagccttcacccagtacaagaagctgaagcgaatagacatcagcaag
aatcagatatcggacattgctccagatgccttccagggtctgaaatcactcacatcgctg
gtgctctatgggaacaagatcacggagcttgccaagggactctttgatggactggtgtcc
ctacagctgctcctcctcaatgccaacaagatcaactgtctgcgcgtgaacacatttcag
gacctgcagaacctcaacctgctctccctctatgacaacaagctgcagaccatcagcaag
ggactctttgcccctctgcaggccatccagaccctccacttggcccaaaacccgtttgtg
tgtgactgccacttgaagtggctggccgactacctacaggacaaccccatcgagacgagt
ggggcccgctgcggcagcccgcgccggctggccaacaagcgcatcggccagatcaagagc
aagaagttccgctgctcaggctcagaggattaccgcagcaggttcagcagtgagtgcttc
atggacctcgtgtgccccgagaagtgccgctgcgagggtaccattgtggactgctccaac
cagaagctggcccgcatcccaagccacctccccgaatacgtcaccgatctccgactgaac
gacaatgagatatccgtcctcgaggccaccggtatcttccggaagctgcccaacctgcgg
aaaataaacctgagcaataataagatcaaggaggtgagggagggcgccttcgatggagcg
gcgggcctgcaggagctgatgctgaccgggaaccggctggagacgctacatggacgcatg
ttccagggactccgcagcctcaggactctgatgctgaggagtaacctgatcaactgtgtg
agcaatgacacgtttgctggcctgagttcagtgaggctgctgtccctctatgacaatcgg
atcaccaccatcacccctggcgccttcaccacccttgtctccctgtctaccataaacctc
ctgtccaaccctttcaactgcaactgccacctggcctggcttggcaagtggttgaggaag
cggcgggtcgtgagcgggaacccccggtgccaaaagccattcttcctcaaggagatcccc
atccaggatgtggccatccaggactttacctgtgaaggcaatgacgagagcagctgccag
ctgggcccacactgcccggagcagtgcgcctgcatggagacagtggttcgctgcagcaac
agggggctgcacgccctccccaaaggcattcccaaggacgtgaccgaactgtacctggaa
ggaaaccacttaacagctgtgcccagggagctgtctgccctccgacacctgacacttatt
gacctgagcaacaacagcattggcgtgctgacgaactacacgttcagtaacctgtctcac
ctctccacgctgatcctgagctacaaccggctgcggtgcctccccatccacgccttcgac
gggctgcggtctctccgggtgctgactctccacggcaatgacatttccagcgttcccgaa
ggctccttccgcgacctgacgtctctttcccatctggcactgggaaccaatccactccat
tgtgactgcagtctgcgctggctctcagagtgggtgaaggcggggtacaaggaacccggc
atcgcccgctgcagtagccccgagcccatggccgacagactcctgctcaccacccccacc
caccggttccagtgcaaagggccagtggacatcaacattgcagccaagtgcaatgcctgc
ctctccagcccgtgcaggaacaacgggacgtgcagccaggatcccgtggagctgtaccgc
tgcacctgcccctatggttacaagggcaaagactgcaccgtgcccatcaacacctgcatc
cagaacccctgttggcacgggggcacctgccacctgagcgacagccacaaggacgggttc
agctgctcctgccctctgggctttgagggccagcgctgtgagatcaatccagacgattgc
gaggacaacgactgtgagaacaatgccacctgcgtggacgggatcaacaactacgtgtgt
gtctgccctcctaactacacgggtgagctgtgcgatgaagtgattgaccactgcgtgccc
gggatgaacctctgtcagcatgaggccaagtgcatctccctggacaaaggattcagatgc
gaatgtctccccggctacagtgggaagctctgcgaggtggacaacgatgactgcgtggcc
cacaggtgccgccacggggcccagtgcgtggatgcggttaacagctacacgtgcatctgc
ccccagggcttcagcgggctcctctgtgagcagcccccacccatggtcctgcttcagacc
agtccctgtgaccagtacgagtgccagaatggggcccagtgcatcgtggtacagcaggag
ccgacttgtcgctgccccccaggctttgccggcccgaggtgcgagaagctcatcaccgtc
aactttgtgggcaaagactcctacgtggaactagcctctgccaaggtccggccccaggcc
aacatctccctgcaggtggccacggacaaggacaatggcatccttctctacaagggagac
aatgaccccctggcgctggagctgtaccagggccacgtgaggcttgtctatgacagtctg
agctccccacccaccacggtgtacagtgtggagaccgtgaatgatgggcagtttcacagt
gtggagctggtgatgctaaaccaaaccctgaacctggtggtggataaaggagcccccaag
agcctgggaaagctccagaagcagccagcagtaggcatcaacagccccctctacctcgga
ggcatccccacctccacgggcctctcggccctgcgccagggcacagatcggccgctgggc
ggcttccacggctgcatccatgaggtacgcatcaacaacgagctgcaagacttcaaggcc
ctcccgccacaggccctgggagtgtccccgggctgcaagtcctgcaccgtgtgcaagcat
ggcctgtgccactccgtggagaaggacagcgtggtatgcgagtgccacccgggctggacc
ggcccactgtgtgaccaggaagtccgggacccctgtctgggccacagctgcaaccacggg
aaatgtgtgccaaccgggacctcgtacgtgtgcaagtgtgcagaaggctacagcggggcc
acatgtgatcacaagaatgactccaacgcctgctctgccttcaagtgtcaccaggggcaa
tgccatttctccgatcgaggggagcccttctgcctgtgccagcctggcttcagtggggag
cactgcgagcaagagaacccatgcctgggggaggtggtccgagaggtgatccgccgccag
aagggctatgcctcatgtgccacggcctccaaagtgcccatcatggaatgtcgtgggggc
tgtgggccccagtgctgtcaacccacccgcagcaagcggcggaaatacgtcttccagtgc
accgacggctcctcattcgtcgaggaggtggagagacacctcgagtgcggctgccgccca
tgttcctaa
DBGET
integrated database retrieval system