Lutra lutra (Eurasian river otter): 125100895
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Entry
125100895 CDS
T08100
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125100895
Membrane trafficking [BR:
llv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125100895
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Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
SH3_9
SNAP
TPR_1
TPR_MalT
TPR_2
DUF5418
Motif
Other DBs
NCBI-GeneID:
125100895
NCBI-ProteinID:
XP_047587347
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All DBs
Position
5:complement(41645928..41745681)
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AA seq
1289 aa
AA seq
DB search
MGGCFCIPGEPSLSWGPGKETPSKDPTVSSEFIASSEDKERCCLPQNMNPDLTLSFSVKS
RSQRCVNGLLQEAARRRLWALENEDQEVRALFQDLSARLVGIQSQRAQFLITFKTMEEIW
KFSTYLNLGYVSACLEHLLFDHKYWLSCRLVEDTEIQVSVDEKHLETIYLGLLIQEGHFF
CRAMCSVAPPAEKEGEYLTLCKKELISVKIIDSESEWEGVSLVTGQRGLVPLSALEPLPL
PFHQWFLKNYPGSCGLSRKRDWTGSYQIGRGKCKAWKEYEREEKDELNFHRGESIEIIGF
VIPGLQWFIGKSTRSGEVGFVPTRNIDPESYSPMNKSSAFFSDEERCSLWVLGSDRKAEC
ASFLHTLAHTDIASVYRLSGFESIQNLPNDLSASQPEGFKEARPGRAWEEHQAVGSRQSS
SSEDSSLEEELLSAASDSYHLPEPDDLDDPELLVDLDTGQEEEEAENFAPMLAFLDHEGY
ADHFKSLYDFSFSFLTSSFYSFSEEDELMAYLEASRKWAKRGRRTWAHARLCFLLGRLSV
RKVKLSQARVYFEEAMYILNGTFEDLSLVAALYTNLAAIYLRQRLRHRGSALLEKAGALL
ACLPDRESSTKNELDVVAYVLRQGIVTGSCPLEARACFLAIRLLLSLGRHEEVLPFAERL
QLLSGHPPDLEATATILSFLYDKKYLPHLTVASVQERGSQSGQGMSLPIWQVYLVLQNTT
KLLGVPSSSWGEISALACPALRQALAACEGQASWSTQRALCLILSKVYLQHRSPDGAIHY
LSQALVLGQLLSEQEAFESSLCLAWAYLLASQAKKALDILEPLLYSQKETESITQKGVVH
NLLGLALQGEGRVNRAAKSYLRALNRAQEMGNVRNQAVTLANLGHLTLKSWAEQPAKDYF
LQAIRLYSELQTSMETDMELVQVLLWLAQVLVHGRQLASGRLCYEMALLFGLRHRHLKSQ
LQVTKSLCHFYSSVCPNPKACITYHEHWLTLAQQLRDREMEGRLLESLGQLYRNLNTARS
LRKSLTCIKESLRIFIDLGEKDKAAEAWLGAGRLHYLMQEDELVELYLQAAIQKALKSEE
PSLALKLYEEAGDVFFNGTRHRHCAVEYYRAGAIPLARRMKAMRTELRVFNKLTELQISL
EGYEKALEFATLAARLSTVIGDQKQELVAFHRLATVYYSLHMYEMAEDCYLKTLSLCSPW
LQSPKEALYYVKVYYRLGQLTFYQLKDAHDATEYFQLALAAAVLLGDEELQDSIRNRLDH
ICRSPLWHSSPSGRSSERARWLSGGGLAL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcattcccggggagcccagtctgtcctggggcccaggtaaagaa
actccttccaaagatccaactgtatcaagtgagtttatagcctcatctgaagacaaggaa
agatgttgcctgccacagaacatgaatccagatctgacgctctccttcagtgtgaagagc
cgctcccagcggtgtgtaaatggcctcctgcaggaagcggccaggaggcggctctgggcg
ctggagaatgaggaccaggaggtgcgtgccctctttcaggacctctcagccaggctggtg
ggcatccagtcccagagggctcaattcctcatcaccttcaagaccatggaggaaatctgg
aagttttccacctacctgaacttaggctatgtgtctgcatgtctggaacatctcctcttt
gaccataagtactggctcagctgcagattggtggaggatacagagatccaagtgtcagtg
gatgagaaacacctagaaacaatatacctgggccttctgatacaggaaggccacttcttc
tgcagagccatgtgctccgtggctcctccagctgagaaggaaggagagtatttgacgctg
tgcaagaaggagttaatctctgtgaagatcattgacagcgaatccgagtgggagggcgta
tccttggtgactggtcagcggggtctggtgcccctgtcagctctggaacctctgcccctg
cctttccaccaatggtttctaaaaaattatccgggaagctgtggcctttccaggaagagg
gattggacaggctcctatcagatcggcagaggaaaatgtaaggcctggaaggaatatgaa
agggaagaaaaagatgagctgaattttcaccggggagaaagcatcgagatcatcggcttt
gtcatacccgggcttcagtggttcatcgggaagtcgacacgctcaggagaagtgggcttt
gttcccaccaggaacatagatcctgagtcgtattccccgatgaacaagagctctgccttt
ttcagtgacgaggaaagatgctctctttgggtcctgggaagtgacaggaaagctgagtgt
gccagcttcctccacacgcttgctcatactgacatagcgtctgtctaccggcttagtggg
tttgaatccatccagaatcttccaaacgatctaagtgcgtcccagccagaaggcttcaag
gaggccaggcctggcagagcctgggaggagcatcaggccgtgggctccagacagtccagc
agctctgaggactccagcctggaggaggagctcctctcagctgcctcggacagctatcac
ttgcctgagcccgatgacctcgatgacccggaactgctcgtggacctagacactggtcag
gaagaggaggaggcagagaacttcgcccccatgttggcttttctggatcacgagggttat
gctgaccacttcaagagcctctatgatttctccttctctttcctcacgtcttctttctac
agcttctctgaggaggacgaacttatggcctacctggaggcctcaaggaagtgggccaag
cggggccgcaggacctgggcccacgcccggctctgcttcctcctcggccggctgagtgtc
aggaaggtcaaactctctcaggcccgggtctactttgaggaggctatgtacatcctcaat
gggacgtttgaagacctatccctggtggctgctctgtacaccaatttggctgccatctat
ctgaggcagaggctgaggcatagaggctcggctctgctggaaaaagcaggggccctgttg
gcctgcctgcctgaccgggagtctagtaccaaaaatgagctcgatgtggtggcctacgta
ctacgccagggcattgtgacaggcagctgtcccttggaggccagggcctgcttcctggcc
atccgattgctcctaagcctgggccgccatgaggaggtcctgcccttcgccgagcgcctg
cagctcctctctggacaccctcctgacttggaggctacagcaaccatcttgagttttctg
tacgataagaaatatctcccacacctcacagtggcctctgtccaggaacgtggctcccag
agtggccaagggatgtcccttccaatttggcaggtctacctggttctccagaacaccacc
aagctccttggagttccctcttcaagctggggtgaaatttctgccctggcctgcccagca
ctcaggcaggcactggctgcctgtgaggggcaggccagttggagcacccagagggccctg
tgcctcatcctgtccaaagtgtacctccaacatagatctcccgatggggccatccactac
ctgagccaggccttggtgctagggcagctgctgagtgagcaggaagccttcgagtcttcc
ctctgcctggcatgggcgtatctcttagccagccaggcaaaaaaggctttggacatcctt
gagccactcctatactcccagaaggagacagagagtatcacccaaaagggggtggtccat
aacctcctgggacttgcccttcaaggtgaaggccgggtgaacagggcagccaagagctat
ctccgggccttgaacagagctcaggaaatggggaatgtgcgtaaccaggcggtgactttg
gccaatcttggccacctgacccttaagtcctgggctgagcagccagccaaggactatttc
ctgcaggccatccgactctattctgaactccagaccagcatggagacggacatggaatta
gtacaggtccttctctggttggcccaagtcctggtacatggacgccagctggccagtggc
cgcctttgttatgaaatggcattgctgtttggcttaaggcatcgacacctaaagagtcag
cttcaggtcaccaaatccctctgccatttctacagctctgtatgcccaaaccccaaggcc
tgcatcacctaccacgagcactggctgaccctggctcagcaactcagggaccgagagatg
gagggaaggctgctggagtccctcgggcagctctatcggaacttgaacacagccaggtct
ctcaggaagtctctcacctgtatcaaggaaagcctgcgtatcttcattgaccttggggag
aaagacaaggctgctgaggcctggcttggagctgggcgactccactacctcatgcaggag
gacgagctggtggagttgtacctgcaggcagccatccagaaggccttgaagtctgaggag
ccctctctggctctcaaactctatgaagaagcaggtgatgtgttcttcaatgggacacgc
cacagacactgtgccgtggagtattaccgagctggggccattcctttagcgaggaggatg
aaggccatgagaacagagctccgggttttcaacaagctgacagagctgcagatcagccta
gaaggctatgagaaggctttggagtttgccaccctggcagccagactcagcacggtcata
ggagatcagaagcaggagctggtggcctttcaccgtctggctacagtctactattccctg
cacatgtacgagatggctgaggactgctacctgaagactctgtccctttgttccccctgg
ctgcagagccccaaggaggccctgtactatgtgaaggtgtattatcgcctggggcaactc
accttttaccagctgaaggatgcccacgatgccaccgagtacttccagctggccctggca
gcagcggtgctgctgggtgacgaggagctgcaggacagcatcaggaacaggctggaccac
atctgccggagccccctgtggcacagcagcccctccgggcgctcctcagagagggcacgg
tggctgagcggcggggggctggccctctga
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