Lutra lutra (Eurasian river otter): 125101050
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Entry
125101050 CDS
T08100
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125101050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125101050
Membrane trafficking [BR:
llv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125101050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
125101050
NCBI-ProteinID:
XP_047587630
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Position
5:73966783..74032402
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AA seq
1100 aa
AA seq
DB search
MSQPGIPASGGAPTGLQAQNGAASASGSLYSNGPVQNALMSSQVSVNQGYNSQLPGSCPH
LIPAKTLNPVSGQSNYGGSQTVSPLSNYHGPGQTLYRPPVASNPVTPSLHSAPVPRMPLP
TSHNPAATPMPSGSFLPGANVHPPLNWQYNSPSTGSQTNHCPPASSQPTISGNTNLTSHQ
YVSSGDPSFQNNFIKSGSAPALVNPSLPTTFQPGAPLGPPPTGGPPPVRAVTLQKPSHRA
TPQPSFNSAVNQEGIASNTNNGSMVVHNSYDEIEGGGFLATPQHTNKNPTMSRSVGYSYP
SLPPGYQNTGPPSTTGMPPSSLNYSSGPQGFTQTPLGANHLAASMSGLSLHPEGLRVINL
LQERNMLPATPLRPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQTLLNKAKLPLGLLLHP
FKDLVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPLTRV
YGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNL
DLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNESKE
LVQDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALRPRE
EPNQRSSAKEIHLTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSV
YYYPSYHHQQNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDL
LSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNE
VFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVP
FSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLS
DEGALNVNDHTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCGQNFLSQVLGVQN
YALIPQIMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMVEDR
TESALSYYEFLLHIQQQVNK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccggggataccggcctccggcggcgccccaaccggcctccaggcccagaac
ggggccgcctcggcgtcggggtctctctacagcaacggtcctgtccaaaatgcactgatg
tcttcacaagtatcagtgaatcaaggatataattctcagcttccaggatcctgtcctcat
ctaataccagcaaagacattgaatccagtctctggacagtctaactatggtggttctcag
actgtttctccgttaagtaattatcatggacctgggcagactctttacagaccacctgtg
gcttctaatccagtgacaccttcacttcacagtgctcctgttccccgaatgccactacct
acttctcacaacccagctgctacaccaatgccttctggtagctttcttcctggagccaac
gtacatccacctttgaattggcagtataactctccatccacaggatcacagacaaaccat
tgtcctcctgcatcatcccaaccaactatatctgggaatacaaatttgacaagtcatcag
tatgtctcttctggagatccttcatttcaaaacaacttcataaaatcaggttctgcaccc
gccttagtgaacccatctctgcctaccactttccaaccaggagctcctcttgggccccct
ccaactggaggaccacctccagtgagggcagtcactcttcagaaaccatcacatagagct
acgccccagccctcattcaattcagctgtcaaccaagaaggtattgcatcaaataccaat
aatggatctatggtggttcacaatagttatgatgaaattgaaggcggtggcttcttggca
acaccacagcatactaacaagaatcccacaatgagccgaagtgttgggtattcatatccc
tccttaccacctggttatcagaacacaggaccacctagtacaactggaatgccaccctct
tccttgaattactcaagtgggccacagggctttactcagactcccttaggtgctaatcat
ttagctgcaagcatgagtggattaagtctacatccagaggggctaagagttatcaatctt
cttcaagaaagaaacatgcttccagcaacacctttgcggcctcctgttccaaatttgcat
gaagatatccagaaactcaattgtaacccagagttatttcgatgcacgctgactagcatt
cctcagactcagaccttactgaataaagccaaacttcctttgggactgctgcttcatcct
ttcaaagacctagtgcaattgcctgtggttacctccagtacaattgtgagatgccgctcc
tgcaggacatatatcaacccttttgtcagctttctggatcaaaggagatggaagtgtaac
ttatgttatcgagtcaatgatgttcctgaggaattcatgtacaaccctttgactagagtt
tatggagaacctcacagaagacctgaagttcagaatgctactattgaatttatggctcct
tcagaatacatgttacgaccacctcaacctccagtgtacctctttgtatttgatgtatct
cacaatgcagttgaaactggatacttgaattcagtttgccagagtttgttggacaatctg
gatttgcttcctgggaacaccaggacaaaaattggcttcattacatttgatagtacaatc
cacttctacagtcttcaagaaggtctctctcaacctcagatgctaatcgtttcagatatt
gaagatgtttttatacctatgccagagaacttattagtaaatttaaatgaaagtaaagag
cttgttcaagatttactgaaaactttgccacaaatgttcaccaagaccctggaaacccag
agtgccttgggtcctgcacttcaggctgcctttaagctgatgtccccaactggtggtcga
atgtctgtctttcaaacacaacttcctactcttggagtgggagccctgagaccacgggag
gagcccaaccaaaggtcatctgctaaggagattcacttgacaccatccactgacttttac
aagaaattagccttagattgttctggtcagcaggtagccgtggacttattccttctcagt
ggacagtattctgacttggcttctctgggttgtatttctcggtattcagcaggtagtgtc
tattactatccttcttaccaccatcagcagaacccagtacaagtacagaaattacagaag
gaactacagagatacctcactcgaaagattggctttgaggcagtcatgaggattcggtgt
acgaaaggtctttccattcatactttccatgggaacttctttgttcggtcaacagactta
ctgtctttgcctaatgtaaacccagatgctggatatgcagtacagatgtctgtggaagag
agtcttactgacactcagttggtttcctttcagtctgcactcttgtatacgtccagcaaa
ggtgaaagaagaattcgtgttcatacattgtgtttgcctgtggtttcaactctgaatgaa
gtctttcttggagctgatgttcaagcaatttcagggttattggccaatatggctgttgac
aggtctgtgactgccagtctgagtgatgctcgggatgccctagtgaatgctgtcatagac
tctctatcagcttatcgttcttcagtcctaagtaaccagcagcctggactcatggttcct
ttttctttgcggcttttcccactctttgtgttggctctccttaaacagaaatcatttcag
actgggacaaatgcacgtctagatgaacgcatttttgccatgtgtcaggtgaaaaatcag
cccttggtttaccttatgctcacaactcatcccagtttgtatagagttgacaatctctca
gatgagggagcactcaatgtcaatgatcacaccatacctcagccacctattcttcagctt
tctgtggagaagttgagcagggatggagctttcctcatggatgcaggctctgtactgatg
ctttgggttggaaaaaattgtggacaaaattttctcagccaggttctaggagttcaaaac
tatgcattaattccacagattatgacagaccttccagaacttgatacaccagaatctgcc
agaataatagcattcatctcttggcttagagagcagagaccatttttccccatactttat
gtaataagggatgagagtccaatgaaagcaaacttccttcaaaacatggtagaagacaga
acagaatctgcattatcatattatgaattcctcttgcatattcaacagcaagtgaacaaa
tga
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