Lutra lutra (Eurasian river otter): 125101312
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Entry
125101312 CDS
T08100
Name
(RefSeq) transcription factor SOX-30-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125101312
Transcription factors [BR:
llv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125101312
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125101312
NCBI-ProteinID:
XP_047587830
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Position
5:complement(49246296..49277958)
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AA seq
768 aa
AA seq
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MERARPEPQPQPRQLPRATPPRPLRPAPPQLPVEGTSFRTAAAELPPSPPTPCAAAIATV
ASSCGEAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGVIASPAQARLLQLRPEL
LLLPPPPPASDGAPCRPELHPVQSRALHVKAEKQEQGADLDPSAGTRRPVEASPRSSRAA
KVEGPGPALDCHGGDEKKGKLEAEEVMRDVVKGGEGKNLATIREGVIKTEEPERLREDCR
LGTEPASNGLVHGNKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGDA
PPAIQLPTPAVQRPSPISLFQPSVSSTAQVGIQAPSLPLRPALPPQRFAGPSQTDTHQLH
SGASRSMKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgcaacctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctccgccctgctcccccacagctgccggttgagggcacctcctttaggact
gcggccgcggagctccccccgtcgcctcccaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggggaggcccaggcgtcgggtgtacagcccgcggcgcggcggctgctg
caggtgaagccggagcaggtgttgctgctgccgccagggccaccgctggctcaggcccgg
gacgaaggcgtcatcgcctcaccggcgcaagcacggctgctgcagctgaggcccgagctg
ctgctgctgcccccgcctccgcctgcgtccgacggcgccccctgccgaccggagttgcac
ccggtgcagtcccgggcgctgcacgtcaaggctgagaagcaggagcagggggccgacttg
gatccgtcggcggggacgcgaaggcctgtggaggcaagccctaggtcctccagggcggcc
aaggtagagggcccggggccagctctcgactgccacggaggggacgagaagaagggcaag
ctggaggcggaggaggtcatgagggacgtggtgaaaggcggggaaggcaaaaacctggct
accatcagagaaggagtcatcaaaacagaggagcccgagagactccgcgaggactgcagg
ctgggcacggagcccgcgtccaatggcctggtccacggcaacaaagaagtcatcctagct
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctccac
acggtcccccctggagcccggatccaatttcagggacctccgccttcggagctgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatccttactggagccttct
gtaaaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcactagctaaagctaacccagcagccaacaatgca
gaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggtaccacacagaatatcatctctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgatgcc
ccacctgccatccaactgcccacacctgcagtccagcgcccaagccccatctcacttttc
cagcccagcgtctccagtactgcccaggtgggcatccaggctccaagtctgcctctccgt
ccagcactcccgccccagcgctttgctgggccctcccaaacagacactcatcagctgcac
tccggagccagtcgctccatgaagagacctactcccgtctctctggagaacaccaacagg
attccaactagtgcaagtactgcccatgccagatttgcgacctcaaccatccaacctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccaagctcctccccttggccatccagccacgttgtttggg
acaccaccacgattttcttttcatcacccttactttctacctggacctcactacttccca
tcaagcacctgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactatccagatgaacgcacacacagtgaagattct
cggagttgtgagagcatggatgggacctcttactataatagtcatagccacagtggggaa
gaatacttaaatcccatgcctcagctggacattggagccttggagaacgtcttcacagcc
ccaacatcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
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