Lutra lutra (Eurasian river otter): 125101380
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Entry
125101380 CDS
T08100
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2
KO
K03028
26S proteasome regulatory subunit N1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03050
Proteasome
llv05010
Alzheimer disease
llv05012
Parkinson disease
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05017
Spinocerebellar ataxia
llv05020
Prion disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125101380
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125101380
09164 Neurodegenerative disease
05010 Alzheimer disease
125101380
05012 Parkinson disease
125101380
05014 Amyotrophic lateral sclerosis
125101380
05016 Huntington disease
125101380
05017 Spinocerebellar ataxia
125101380
05020 Prion disease
125101380
05022 Pathways of neurodegeneration - multiple diseases
125101380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
llv03051
]
125101380
Proteasome [BR:
llv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
125101380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
THAP
Motif
Other DBs
NCBI-GeneID:
125101380
NCBI-ProteinID:
XP_047587858
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All DBs
Position
1:108348208..108358011
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AA seq
908 aa
AA seq
DB search
MEEGGRDKAPVQPQQPPATAQGVADEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKTQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggtggccgggacaaggctccggtgcagcctcagcaacccccagcgacggcg
cagggcgtcgcggacgagaagccgagcggcaaggagcggcgagatgctggcgacaaggac
aaagaacaggagctgtctgaggaggacaaacaacttcaggatgaactggagatgctcgtg
gaacgactgggggagaaggacacttccctgtaccgaccagccctggaggagctgcggagg
caaattcgatcttctacaacttccatgacttcagtacccaagcctctcaaatttctgcgt
ccacactatggcaaactgaaggaaatctatgagaacatggcccctggggagaataagcgt
tttgctgctgacatcatctctgttttggccatgaccatgagtggggaacgggagtgcctc
aagtatcggctggtgggttcccaggaggaattggcatcatggggtcacgagtatgtcagg
catcttgcaggggaagtggctaaggagtggcaggagctggatgatgcggaaaagacacaa
cgggaaccactgctgaccctggtgaaggagattgtcccctataatatggcccataatgca
gagcacgaggcctgtgacctgctcatggaaattgagcaggtggatatgctggagaaggac
atagatgagaatgcatatgcaaaggtctgcctctatcttaccagttgtgtgaattacgtg
cccgaacctgagaattctgccttgctgcgctgtgcattgggtgtgttccgaaagttcagt
cgctttcctgaagctctgagattggcgttgatgctcaatgacatggagctggtagaagac
atcttcacctcctgcaaggatgtggtagtacagaagcagatggcattcatgcttggccgg
catggggtgtttctggagcttagtgaagatgtggaggaatatgaggacctgacagagatc
atgtccaatgtacagctcaacagcaacttcttggcattagctagggagctggacatcatg
gagcccaaggtgcctgatgacatctataaaacccatctagagaacaacaggtttgggggc
agtggctctcaagtggactctgcccgcatgaacctggcctcttcttttgtgaatggcttt
gtgaatgctgcttttggccaagacaagctactgactgatgatggcaacaaatggctttac
aagaacaaagaccatggaatgttgagtgcagctgcatcccttggcatgattctgttgtgg
gatgtggatggtggcctcacccagattgacaagtacttgtactcctctgaggactatatc
aagtcaggagcccttctagcctgtggcatcgtgaactctggggtcaggaatgagtgtgac
cccgctctggcactactctcagactatgttcttcacaacagcaacaccatgagacttggt
tccatctttgggctaggcttggcttatgctggctccaatcgtgaagacgttctaacactg
ctactccctgtgatgggagattccaagtctagtatggaggtggcaggtgtgacagctcta
gcctgtggaatgatagcagtgggatcctgcaacggagacgtcacttccactatccttcag
accatcatggagaagtcagagactgagctcaaggacacctatgcccgttggcttcctctt
ggactgggcctcaaccatctgggcaagggcgaggccattgaggcaatcctggcggcgttg
gaggttgtgtctgagccatttcgcagttttgccaacacgctagtggatgtgtgtgcctat
gcaggctctgggaatgtactgaaggtacagcagctgctccatatttgtagcgaacacttt
gactccaaggagaaagaggaagacaaggacaagaaggaaaagaaggataaggacaagaag
gaagcccctgctgacatgggagcacatcagggagtggctgtgctggggattgcccttatt
gctatgggggaagagatcggtgcagagatggcactacgaacctttggccacttgctgaga
tacggggagcctacactccgacgggctgtacctttagcactggccctaatctctgtttca
aatccacgactcaacatcctggataccctaagcaaattttctcatgatgctgacccagaa
gtttcctacaactccatctttgccatggggatggtgggcagtggtaccaataatgcccgt
ctggctgccatgctgcgccagttagcccagtatcatgccaaggaccccaacaacctcttc
atggtgcgcttggcacagggcttgacacatttagggaagggcacactcaccctctgcccc
taccacagtgaccggcagcttatgagtcaagtggctgtggctggactgctcactgtgctt
gtctctttcctggatgtccgtaacataatcctgggcaaatctcactatgtattgtacgga
ctggtggctgccatgcagccccgcatgctggttacatttgatgaggagctgcggccgctg
ccagtgtctgtccgtgtgggccaggcagtggatgtggtaggccaggccggcaagcctaag
actatcacggggttccagacacacacaaccccagtactgttggcccacggggagcgggca
gaattggccactgaggagtttcttcctgtcacccccatcctggaaggttttgttatactt
cggaagaaccctaactatgacctctaa
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