Lutra lutra (Eurasian river otter): 125101655
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Entry
125101655 CDS
T08100
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125101655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125101655
Membrane trafficking [BR:
llv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125101655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Clathrin
Beta-prop_WDR3_1st
Beta-prop_WDR5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
125101655
NCBI-ProteinID:
XP_047587971
LinkDB
All DBs
Position
1:108799136..109047004
Genome browser
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLLAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPCKAAELVAIHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGVHVHQE
LVQMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQDEKTKEKLSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLHPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTKGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKVGKLNE
NSSEVKKGKTAPSQVKMSPSCHPSKGDSAIKKAVSEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctcctcgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggaattcaaaaatgatttgattgatgacaaggagtttgatattcct
caagttgatactcctccgacactggaaagcatacttaatgagactgatgatgaagaggaa
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcgtctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtatccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgagactctgtctgggtagtactagtgttggaggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggattcgctaaa
ggacagatcacgatgtgggatttggccagcggaaaacttctacgatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaactgacatttaagagagtgatgggagtgaga
acatgtgagtctaggtgtctattcagtggttccaagggtgaagtttgctgtattgagcct
ctccattcgaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtacataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaattcatgttactaagcaaaagcaccttcacctc
tactatgatctcatcaactttacttggataaactcacgcacagttgtgctcttggacagc
gtggagaagttgcatgtgattgatcgacagactcaagaagaactggaaacagtggagatc
tcagaagttcagctggtctataacagcagccatttcaaatccctggccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtaatgatgctgagaagctgg
agagagagagtggatcatctcctcaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcgaaagctgtagtgggattatcaggagatgccagtaag
cgcaaggctgttgttgccgatcggatggtagaaatcctcttccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcatttccaggacatg
gtgcctgtcatcgttgattactgcctgctgttggagcgaaaggatcttttatttagccag
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgag
ccatatattttaagtgataaattggtggggatgaccccacaggtaatgaaagacttgatt
gttcactttcaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctttgaacgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtcttgcgggccgagcctatcccctt
ggtgatatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcttgcattcagcagaagcttcccccgaggaagaaatctacccctacgttaggactctg
ctacattttgacacaagagaatttctaaatgtgttggcactgacctttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattccgatttcactccctcacaagttgggtgtctcttcaccttccttgcccgg
cagctcgcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccggatggca
gagaaagcagaattctatcaaatttgcgagtttatgtatgaacgagaacaccaatatgac
aaaataattgattgctacttacgtgacccactaagggaggaagaagtctttaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatatagaggaacttgtatccctgaggccttgtaaagctgcagagctggtt
gctattcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttctgaggagtcttcttgacccaagggagggtgttcacgtacatcaggaa
ttggtgcagatgtctccatgtgtgacggagcagttcattgagctgttgtgtcagtttagc
ccaaaccaggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaagga
gatattcatggtgccttcttaataatgctaaagagactacaaagcaaacttcaagagata
acacatcaagatgaaaagaccaaagagaagctctcattgaaggacgttgaagataccatg
gtagagacaattgccctttgccagagaaattcccataatttgaaccagcagcaacgagag
gcactctggtttccattactggaggcaatgatggccccccagaagctctctggatcagct
gcacctcatctgcacccggaagctctgaagtctctgaccatgcaagttctcaacagcatg
gcagcgtttattgccctcccatcgatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gaacaaaccctgctggaaacaactactagccttctaaaccaagatcttcattggtcatta
tgtaacctgagagcttcagtcaccaaaggactgaatcccaagcaagattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcattgtctttagctgt
ggccatttgtaccactcattctgtctacaaaacaaagaatgcaccatagagaccgagggg
cagacgagatggacctgctacaaatgcagctcaagtaacaaagtagggaaattaaatgaa
aactcatctgaagttaaaaaggggaagacagccccatcccaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctgctattaagaaggcagtctcagaacctgtcctggac
ccacagcaaatccaagcgtttgatcagctttgccgtctctaccgaggaagttcccggctg
gctctcctcacagaactctcccagaatcgcagcagtgagagctacaggccattcagtggc
tcccagagtggccctgctttcaacagcatcttccagaatgagaatttccagctgcagctc
attcccccgcctgtgactgaggactga
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