Lutra lutra (Eurasian river otter): 125101778
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Entry
125101778 CDS
T08100
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125101778
Membrane trafficking [BR:
llv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125101778
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125101778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
Beta-prop_Vps41
WD40_like
MIOS_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
125101778
NCBI-ProteinID:
XP_047588171
LinkDB
All DBs
Position
6:97523211..97708598
Genome browser
AA seq
1152 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSSSASQQQQQQQHPAGNREPEIQETLQSEHFQLCKTVRHGFPYQ
PSALAFDPVQKILAVGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALAD
DTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEA
IHSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPIQTITPHGKQLKDGKKPEPCKPILKVE
FKTTRSGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDF
QEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSV
GARQKRQGYSKKEWPINGGNWGLGVQSYPEIIITGHADGSVKFWDASAITLQVLYKLKTS
KVFEKSRNKDERPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVITEV
IPMLEVRLLYEINDVESPEGEQAPPLPTPVGGSTPQPIPPQSHPSTSSSSSDGLRDNVPC
LKVKSSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSSYGLVVFGNCNGIAMVDYLQ
KAVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSGSSS
PHNSDDEQKMNNFIEKVKTKSRKFSKMVASDIAKMSRKLSLPTDLKPDLDIKDNSFSRSR
SSSVTSIDKESREAISALHFCETFTRKADSSPSPCLWVGTTLGTVLVIALNLPPGGEQRL
LQPVIVSPSGTILRLKGAILRMAFLDTTGCLVPPAYESWREHNVPEEKDEKEKLKKRRPV
SVSPSSSQEISENQYAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSICL
ACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYS
QETCENLQEMLGELFTPLETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRSLAQ
HIPGPGGIEGVKGAASGVVGELARARLALDERGQKLGDLEERTAAMLSSADSFSKHAHEM
MLKYKDKKWYQF
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattcaacatcaggaaggtgctggacggcctgaccgccggctcgtcctcggcc
tcgcagcagcagcagcaacagcagcacccggctgggaaccgggagcccgagatccaggaa
acgctccagtccgagcactttcagctctgcaagactgttcgccatggatttccctatcaa
ccttcagccctggcctttgatcctgtacagaagatcctggcagttggaactcagactggt
gctttaaggctctttggtcgtccaggagtagaatgttattgccagcatgacagtggggct
gcagtaatccaacttcagttcctgattaatgagggagctcttgtgagtgccttggctgat
gacaccttacatttatggaatttacgtcaaaagagacctgccatactacattcacttaaa
ttttgcagagaaagggttacattttgccatctgcctttccagagtaagtggctctatgtg
ggcactgagcgaggtaatatacatattgtcaatgtggagtccttcacactctcaggctac
gtcattatgtggaataaagccattgaactgtcatctaaatctcatccaggaccagttgtc
catataagtgataacccaatggatgaaggaaagcttttgattggctttgaatcaggaaca
gtagtgttatgggacctcaaatcaaagaaagctgactacagatacacgtatgatgaggct
attcactctgttgcttggcatcatgagggaaaacaatttatttgcagtcattcagatggt
accttgactatatggaatgtgaggtctccagccaagcctatacagacaatcactccacat
ggaaaacaattaaaggatgggaagaagccagaaccctgcaaacctatcctcaaggtggaa
ttcaaaacgactagatctggggaaccttttattattttatcaggaggtttgtcctatgat
actgtaggaagaagaccctgcttaacagttatgcatgggaagagtactgctgtgctggaa
atggactattcaattgttgattttctaacgctgtgtgaaacaccatacccaaatgatttt
caggaaccatatgctgtagtagttcttctggaaaaggatttagtacttatagacctggca
caaaatggatatcctatatttgaaaatccctaccctttgactatacatgaatcccctgtt
acatgttgcgaatattttgctgattgtcctgtggaccttattcctgcactttattctgtt
ggagctagacagaagcggcaaggttacagcaaaaaggaatggcccattaatggaggtaat
tggggcttgggtgttcaaagttacccagaaataattattacagggcatgctgatgggtca
gttaagttctgggatgcttctgcaataactctacaagtactatataaactaaagacatcg
aaagtatttgaaaagtcaagaaataaagatgagaggccaaacacagacattgtagatgaa
gatccgtatgccattcagatcatctcctggtgtccagaaagtagaatgctgtgcatagct
ggagtttccgctcatgttattatttatagattcagcaaacaagaagtgattacagaagtc
attccaatgcttgaagttcgattgttatatgagataaatgatgtggaatccccagaggga
gaacaggcaccgcctttgccaacaccagttgggggttctactcctcagcccattcctcct
cagtctcatccttctaccagtagcagttcatctgatgggcttcgtgataatgtcccttgt
ttaaaagttaaaagttcaccacttaagcagtctccaggttatcagacagaactagttatt
cagttggtatgggtcggtggagaaccaccacaacaaataaccagcctggcagtcaattct
tcgtatggattggtagtttttggcaattgtaatggcatcgcaatggtagactacctccag
aaagcagtactcctcaacctgggcactattgaattatatggctccaatgatccttatcgg
agagaaccccggtctcctcgtaaatctcgacaaccttcaggagcaggtctgtgtgatatt
agtgaagggactgtagtcccagaggatcgctgcaaatctccaacttctggttcttcatca
ccacacaattcagatgatgaacaaaaaatgaataattttatagaaaaggtgaagaccaaa
agcagaaagttttccaagatggtagccagtgatatagcaaagatgtcaaggaagttaagc
ttgcctactgacctaaaacctgacttagatataaaagataattccttcagccgatcacgg
agttccagtgtaaccagcattgataaagaatctcgagaagcaatttctgctcttcatttc
tgtgaaacttttactcgaaaggcagattcatctccctccccatgtttatgggttggtact
acattgggaacagtgctagttattgcactgaaccttcccccaggaggagaacaaagactt
cttcagccagtcattgtctctccaagtggtactatattgaggttaaaaggggcgatcctg
agaatggcattcctggataccacaggctgcttagtgccacctgcgtatgaatcctggaga
gaacacaatgttcctgaagaaaaagatgaaaaggagaaattaaagaaacgacgacctgtc
tccgtatccccctcctcttctcaggaaattagtgaaaaccagtatgccgtgatatgttct
gaaaagcaagcaaaagtcatctcactgccaactcagaactgtgcttacaagcaaaacatt
acagagacctcatttgtgcttcgtggagatatcgtagcattgagtaacagtatttgcctt
gcctgcttctgcgccaacggacatattatgacttttagtttgccaagtttaaggcctcta
ctggatgtatattacttgcccctcaccaacatgcggatagccagaacattctgcttcgcc
aacaatggacaagcattatatcttgtttcacctacagaaatccagagactcacttacagt
caagagacctgtgaaaatcttcaggaaatgttgggtgaactcttcactcctctagaaaca
cctgaagcaccaaacaggggattctttaaaggcttatttggaggtggtgcacaatctctt
gatagagaagaactgtttggagaatcatcctcaggaaaggcctcaaggagtcttgcacag
catatccctggccctggcggcattgaaggcgtgaaaggagcagcatctggagtcgtcggt
gaattagcacgagccaggttggcactagatgaaagagggcagaaacttggtgacctggaa
gaaagaactgcagctatgttgtccagtgcagattcgttttctaaacatgcacatgagatg
atgttgaaatacaaagataagaagtggtaccagttctga
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