Lutra lutra (Eurasian river otter): 125101856
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Entry
125101856 CDS
T08100
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
llv05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125101856
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
125101856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125101856
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125101856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
125101856
NCBI-ProteinID:
XP_047588325
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All DBs
Position
6:complement(86505343..86590496)
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AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDRPSLGEPVEEDDYD
DLKESSNSLLNHQLSGIDQARLYSCLDHMREVLGDTVPDDTLIEAVLKNKFDVQKALAVV
LEQDKMQNWKVKSEGATPAGKIAKGKSVDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTPQKGHLSEGTGIAASDVLDTVSKPVLPSHTIQTSEEQSSTPAPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSNELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcgcggcgtgacagaccttcccttggtgagcctgtagaagaagacgattacgac
gatctgaaagagtcctccaattctctcttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtgcttggagacactgtgccagatgac
actttgattgaagctgttctgaagaacaagtttgatgtgcagaaggctttggcagtggtt
ctggaacaagataaaatgcagaattggaaggtcaagagtgagggagcaacacctgcaggg
aagatagcaaaaggaaaatcagtagactcccaatcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaactgaagaaaatggtcatagtttccacacacctcaaaaaggacatcttagtgaa
ggaactggcattgctgcttctgatgttcttgacactgtttctaaaccagttcttccatcc
cacaccattcaaacatcagaagagcagagctcaacaccagcgccggtgaaaaagtctggc
aagctgaggcagcaaatagatgtcaaagcagaactggagaagcggcaaggagggaaacag
ctccttaacttggtggtcattggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacgaagtttgagaccacaaccaaagtt
attacgttaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggctgatgtagccattttagttgtggacgccagcaggggagagtttgaagctggg
tttgagactgggggacaaacacgagaacatggcctcttggttcgctctcttggagtcacc
cagcttgcggttgcagtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaagcttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctacgagtggtctcagtggtgaaaatctaatcacaagatctcaatcaaat
gaactcacaaaatggtataaaggactttgtttattagaacaaattgattctttcaagcct
cctcagcgatctattgataagccttttagattatgtgtgtctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctcctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgatgaa
cccgtcgactgggcggcagcaggtgatcatgttagtcttacgttggttggcatggatatc
atcaagatcaatgttggctgcatattttgtggccccaaagaacccattaaagcttgtact
cgtttcagagcgcgaatcctcatctttaatattgaaattcctatcactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgccgttattaaacgactgattagtgtc
ttaaacaaaagcacaggtgaagtcacaaagaagaagccaaaactgttgactaaaggccag
aatgccttggtggagctgcagacacaacgcccagtggctctggagctgtacaaagacttc
aaggagctgggcaggttcatgctgcgctacagtggctccaccattgccgcaggcgtggtc
acggagataaaagaatga
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