Lutra lutra (Eurasian river otter): 125101943
Help
Entry
125101943 CDS
T08100
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llv03400
]
125101943
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125101943
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125101943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
DUF4795
T2SSE
AAA_30
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
125101943
NCBI-ProteinID:
XP_047588531
LinkDB
All DBs
Position
6:complement(122930732..123269381)
Genome browser
AA seq
2202 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKVKRSKLHEQIVDLDVMWKKIVKFLNEKLDK
SEMQSVNEDLNDILQAAKQIVGIGNGKEAIESAAAFLFKTFRLKDCVGHKETKAIKQMFG
PFPSSSATAACNATNRITSRFRQDNLTALIQVTEEEDDDRVLFGKNLAFSFDMHDLDHFD
ELPINGEPQKTISLDYKKFLNEHFQEHSTPELKPVEKTNDSFLWCEVEKYLNATLNEMAE
ATRIEDLCCTLYDMLASVKSGDELQNELFELLGPDGLELIEKLLQNRITIVDRFLNSSND
HKLQALQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRIARRERKSGEDGEV
AEGLLCFDPKELRIQREQALLNARSVPILSRQRDTDVEKIRYPHVYDSQAEAMRTSAFIA
GAKMILPEGIQRENNKMYEEVKIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMRRLNRI
QSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMK
ALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVA
LSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATF
LHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAGHQVMV
FVHARNATVRTAMSLIERAKNSGQISCFLPTQGPEYGHAEKQVQKSRNKQLRELFPDGFS
IHHAGMLRQDRNLVETLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVD
LGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNA
EIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTLAKHREQLVIEVGRK
LDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNEFFDAHKTESDIFAIVSKAEE
FDQIKVREEEIEELDALLNNFCELAAPGGVENSYGKINILLQTYISRGEMDSFSLISDSA
YVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTR
LEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVSMEASIQPITRTVLRVTL
SICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISKEAQLLVFTIPIF
EPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGCEAYEA
LYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAP
LKALVRERMDDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQN
RNYVKQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLA
DWLNIHQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI
FVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIGTLRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIA
GGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNKFLSSLVEKSLVELEHSYC
IEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTEELLSILSDAEEYTDLPV
RHNEDHMNSELAKCLPFESNPHSFDSPHTKAHLLLQAHLSRTMLPCPDYDTDTKTVLDQA
LRVCQAMLDVAANQGWLVTALNITNLVQMVIQGRWLKDSSLLSVPNIEHHHLHVFRKWSP
GIKGGRGGGHGVIDCLPELIHACGGKDHVFSSMMENELPAVKMKQAWNFLSRLPVIDVGL
SVKGWWDDSVEGHGELSITTLTSDKRNDNRWIRLHADQEYVLQVSLQRVHFGFHKGKQDS
HAVTPRFPKLKDEGWFLILGEVDKRELIALKRVGYVRNHHIVSISFYTPELPGRYIYTLY
LMSDCYLGLDQQYDIHLNVTPASISAQVNEEVSEALTDLEMK
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggctttaccacgtctcacaggagctttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtggctgacttaaaggtgaagcggtctaaacttcatgaacaaatt
gtagacttggatgtgatgtggaagaagatagtaaaatttttgaatgaaaaactggacaag
agtgaaatgcaaagtgtaaatgaagacttaaatgatatattacaggctgcaaaacagata
gttggaataggtaatgggaaagaagcaattgaaagtgcagctgcatttctcttcaagaca
tttcgcttgaaggactgtgttggtcacaaggagacaaaggctatcaaacagatgtttggt
ccctttccatcgtcatctgccactgcagcttgtaatgctactaatcgaattacttctcgt
tttcgtcaagacaatctcactgctcttatccaggtgacagaagaagaagatgatgataga
gttttatttggtaaaaatttagcattttcatttgacatgcatgatttggaccactttgat
gaactgccaataaatggtgaaccccagaaaactataagccttgattataagaagtttctg
aatgaacattttcaggagcattccaccccagagcttaagcctgtggaaaaaacaaatgac
tcctttttgtggtgtgaagttgagaagtacttaaatgcaactctaaatgagatggctgaa
gcaacaagaatagaagatctttgctgtactttatatgatatgcttgcttccgttaaaagt
ggtgatgaacttcagaatgagctgtttgaactgctgggacctgatggacttgaacttatt
gagaaactccttcagaacagaattacaattgtggatagatttcttaattcttcaaatgat
cataagttgcaggctcttcaagacaattgcaaaaaaattttaggagaaaatgctaaacct
aattatggatgtcaagttactattcagtctgaacaagaaaaacaattaatgaaacagtat
cgccgtgaagaaaaaagaattgccagacgagaaagaaagtctggagaagatggagaagtt
gcggaaggacttttgtgctttgatcctaaggaattgcggatacaaagagagcaggcactt
ctgaatgctagaagtgttccaattctgagcaggcaaagagacacggatgttgaaaaaata
cgttatccccatgtttatgattcccaggctgaagccatgagaacatcagcattcattgct
ggtgcaaagatgattttaccagaaggaatccaaagagagaataacaagatgtatgaagaa
gtaaagattccctatagtgaaccaatgccagttggctttgaggaaaaaccagtttatatc
caagacttagatgagattgggcagctggcttttaaaggaatgaggagactcaatagaatc
cagtcaatcgtgtttgagactgcctacaacaccaacgagaacatgctgatttgtgcccct
actggggctggaaagaccaacattgcaatgcttacagttttgcatgaaatacgccagcat
tttcaacaaggtgttatcaaaaagaatgaatttaagattgtatatgtggctccgatgaag
gccttggcagctgaaatgacaaattacttcagcaaacgtctagagccactaggcattgtt
gtgaaagaattgactggggatatgcagttgtcaaaaaatgaaattttacgaactcagatg
cttgtgaccaccccagaaaaatgggatgtagtgacaagaaagagtgtcggagatgtagct
ctttcccaaattgtaaagctccttattcttgatgaagttcatttgctgcatgaagataga
ggaccagtcttagaaagcatagtggcacgtactttacggcaggtggaatccacacagagt
atgataaggattcttgggctctctgcgaccttacccaactacttggatgttgctacattt
ttacacgttaatccctgtattggacttttctactttgatggccgttttcgaccagttcct
cttggacagacatttctgggagttaaaagtgcaaataaggtacagcaattgaataatatg
gacgaagtatgctatgaaagtgttttgaagcaagtaaaggctgggcaccaggtgatggtg
tttgtacatgctcgaaacgccactgtaagaacagctatgtctctaatagaaagagcaaag
aatagtggtcagatttcctgctttttacctacacaaggacctgaatatggacatgcagaa
aagcaggtgcagaagtcaagaaataagcaactacgagaattatttccagatggtttcagt
attcatcacgcagggatgcttcggcaggacagaaatttggttgaaacccttttctctaat
gggcatatcaaagttctagtctgcacagcgacactcgcctggggtgtcaatcttcctgct
catgctgttattattaagggaacacaaatatatgcagcaaaaagaggctcctttgttgac
cttggaattttagatgtcatgcagatatttggtcgagctggaagaccacagtttgacaaa
tttggggaaggaatcatcataacaacacatgacaaactcagccattacctcaccttgctc
actcaacaaaacccaattgagagtcagtttctggaaagccttgcggataacctaaatgca
gagattgctctgggaacagttactaatgtggaagaagcagtgaagtggataagttacact
tatctttatgtacggatgagagcaaatccattagtatatggcatcagtcacaaggcttac
cagattgacccaacattagcaaagcatcgagaacagttggtcattgaagttggtcgaaaa
ttagacaaagctcggatgattcgttttgaagagagaactggatatttttcctccactgat
ttgggtagaactgccagccactactatattaaatacaataccattgagaccttcaatgaa
ttctttgatgctcacaaaacagaaagtgatatttttgctatcgtctccaaagctgaagaa
tttgatcaaatcaaggtcagagaagaggaaatagaagagctagatgctttattaaacaat
ttctgtgaactcgcagctcctggaggtgtagagaacagttacgggaaaataaacatccta
cttcaaacttatatcagccgaggagagatggacagtttctcccttatatcagattctgca
tatgttgcacagaatgcagctagaattgtccgtgctctttttgaaattgctctgaggaaa
cgttggcctgccatgacctacaggctcctgaatcttagtaaagtcattgacaagaggctt
tggggttgggctagccctttgagacagttttcagtcttaccaccacacattctaacaaga
ttagaagaaaaaaatcttactgtggataaactgaaagacatgaggaaagatgaaataggt
cacatgctgcatcatgtgaatattggactcaaggtcaaacagtgtgttcatcagattcct
tctgtgtcaatggaagcatccattcagcccatcacacggactgtcctccgagtgacactg
agcatctgtcctgattttacttggaatgatcaggtccatgggacagtaggagaaccttgg
tggatttgggtagaagatcctacaaatgatcatatttatcattcagagtattttctagtt
ctgaaaaaacaggtcattagtaaagaagctcaacttctggtatttacaatccctattttt
gagcctttgccttcccaatactacatccgagcagtgtctgatagatggttaggagctgag
gctgtatgtattatcaactttcaacatctgattctaccagagagacatcctccccataca
gaattactggatcttcagcctttaccaattacagctttgggatgtgaggcatatgaagcc
ctgtacaactttagccacttcaaccctgtgcagacacagatatttcatacactgtatcac
acagactgtaatgtcctacttggagcacccactggatcaggaaagactgttgctgccgaa
ttagccattttcagagtcttcaacaagtaccctacttcaaaggcagtatatattgcaccc
ttaaaagccctggtacgtgaaagaatggatgattggaaagttagaatagaagaaaaactt
ggcaaaaaagttattgaactaaccggggatgtgactcccgatatgaaatccattgctaag
gctgaccttatcgtcactacaccagagaagtgggatggagtcagtagaagctggcagaat
aggaactatgtgaagcaggtcactattctgatcatcgatgagatccatctgcttggggag
gaaagaggccctgttctagaagtcattgtatctcgaacaaatttcatctcctcgcacaca
gaaaaacctgttagaatagttggactatctaccgcattagctaatgctagagaccttgct
gactggctcaatattcatcagatgggcttattcaacttccgaccatcagtacgtccagtt
ccactggaagttcacattcaaggcttcccaggtcaacattactgtcctcgtatggctagt
atgaataagcctacatttcaagcaattagaagccattctccagccaaacctgttttgata
tttgtctcatcaagacgtcaaactcgtcttactgctttggaattgatagcctttctggct
actgaagaagatccaaagcagtggttgaatatggacgaaagagagatggagaatatcatt
gggacactgagagattccaacctgaagttaacacttgctttcggaataggaatgcatcat
gctggactacatgagagggaccgaaaaacagtagaggagctgtttgtaaactgtaaagtt
caggttctgattgctacaagtacattagcctggggtgtaaactttccagctcatttagta
atcattaagggaacagaatattatgatggaaaaacaagacgttatgtggattttcccatt
acagatgtactccagatgatggggcgtgctgggaggcctcagtttgatgaccaaggcaaa
gctgtaattctggttcatgacataaagaaagacttttacaaaaaatttctttatgaacct
ttcccagtagagtcaagcttattgggagtgctctctgaccatttaaatgcagagattgct
ggtggtacaattacatctaagcaagatgcaatggattatatcacctggacctactttttc
cgacgtcttatcatgaaccccagttactacaatttgagtgatgtgagccatgattctgtg
aacaaatttctgtccagtctggttgagaagtctctggttgaattggaacattcctactgt
attgaaattggagaggataatcggagcattgagcctctgacatatggccgaattgcctct
tactactatttgaagcaccaaacagttaaaatgttcaaagagcgtttgaaacctgaatgc
ggtaccgaagaattgctttcaattttgagtgatgcagaagaatacacagatttgcctgta
agacataatgaagatcatatgaatagtgaactggcaaaatgtcttccctttgaatcaaat
cctcattcatttgatagccctcacaccaaagcacatctcctactacaggcacatctcagc
agaaccatgctgccctgcccagactatgacacggacaccaaaacagtattggaccaggcg
ctcagagtatgtcaggcaatgctggatgtggctgcaaaccagggctggctggtgacagcc
ctgaatatcaccaatctggttcagatggtgatccagggtcggtggttaaaggattcttct
cttctttcagtaccaaacatagaacaccaccatcttcacgttttcaggaaatggagccca
ggtataaagggcggacgtggtgggggccatggcgtcatcgattgccttccggaactgatc
catgcctgcggagggaaagaccatgtattcagctccatgatggaaaatgaactgccagct
gtgaaaatgaagcaggcgtggaatttcttatcccgcttgccagtgatagatgttggctta
agcgttaaaggctggtgggatgactcagtggagggacacggtgaactctctatcacaaca
ctgacttcagacaagcgaaatgacaacaggtggatcagattgcacgctgatcaagagtat
gtgcttcaagtcagcctgcagcgagtgcactttgggttccacaagggaaagcaagacagc
catgcagttaccccccgatttcccaaattgaaagatgaaggatggtttttgatactagga
gaagtggataagagagaacttatcgctttgaaaagagtaggatatgttcgaaatcatcac
attgtttccatttctttttatacgcctgaactacccggaaggtatatctacacactctat
ctcatgagcgactgttaccttggcctggaccagcagtatgacattcatctcaatgtcaca
cccgcgagcatttccgcccaggtcaacgaggaggtctctgaggccttgactgacctggaa
atgaagtaa
DBGET
integrated database retrieval system
