Lutra lutra (Eurasian river otter): 125101958
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Entry
125101958 CDS
T08100
Name
(RefSeq) transcription factor EB isoform X1
KO
K15590
transcription factor EB
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04020
Calcium signaling pathway
llv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125101958
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125101958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125101958
Transcription factors [BR:
llv03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
125101958
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
125101958
NCBI-ProteinID:
XP_047588555
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Position
6:63863162..63916971
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AA seq
478 aa
AA seq
DB search
MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQALGGPPTPAISTPVHFQ
SPPPVPGEVLKVQSYLENPTSYHLQQSRDQKVREYLSETYGNKFAAHISPAQGSPKPLPA
ASPGVRAGHVMSSSAGNSAPNSPMAMLHIGSNPEREFDVIDNIMCLDDVLGFINPETQMP
NTLPLSSSRLNVYSGDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHN
LIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENH
SRRLEMTNKQLLLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALL
LEAEVPDPEPLRVLPPQAPLPLPAQPPQPPSPFHHLDFSHSLSFGGGGDEGPPGYPEPLG
PEHGSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEGDVL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgcatcgggctgcgcatgcagctcatgcgggagcaggcgcagcaggaggag
cagcgggagcgcatgcagcagcaggccgtcatgcattacatgcagcagcagcagcagcag
cagcagcaggcgctgggtgggccgcccactccggccatcagcacccccgtccacttccag
tctccgccacctgtgccaggggaggtcctgaaggtgcagtcctacctggagaaccccacc
tcctaccacctgcagcagtcccgggaccagaaggtgcgggagtacctgtctgagacctac
gggaacaagtttgccgcccacatcagccccgcccagggctccccgaagcccctgccggcg
gcctccccgggggtgcgggctgggcatgtgatgtcctcctcagccggcaacagtgctccc
aacagccccatggccatgctgcacatcggctccaaccccgagagggagtttgatgtcatt
gacaacattatgtgtctggatgatgtcctgggcttcatcaaccccgaaactcagatgccc
aacacgttgcccctgtctagcagccgcctgaacgtgtacagtggtgacccccaggtcact
gcctccctggtgggcgtcaccagcagctcctgccctgctgacctgacccagaagcgagag
cttacagatgcagagagccgggccctggccaaggagcggcagaagaaagacaatcacaac
ctaattgaacggaggcggaggttcaacatcaatgaccggatcaaggagctgggaatgctg
atccccaaggccaacgacctggacgtgcgctggaacaagggcaccatcctcaaggcctct
gtcgactatatccggaggatgcagaaggacctgcagaagtcccgggagctcgagaaccac
tctcggcgcttggagatgaccaacaagcagctcttgctccgcatccaggagctggaaatg
caagctcgagtacatggtctgcccaccacctcgccatcgggcatgaatatggctgagctg
gcccagcaggtggtgaagcaggagctgcccagtgaggagggccccggggaagccctgcta
ttggaggccgaggtcccggatcctgagccgctgcgggttctgcccccccaggccccgctg
cccctgccagcccagccacctcagccgccgtccccattccaccacctggactttagccac
agcctaagctttgggggcgggggcgatgaagggcccccaggctatcccgagcctctgggg
ccagagcatggctccccgttccccaacttgtccaagaaggatctggacctcatgctcctg
gacgactcactgctaccgctggcctctgaccctctcttctccaccatgtcccctgaggct
tccaaggccagtagccgccggagcagcttcagcatggaggagggcgacgtgctgtga
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