Lutra lutra (Eurasian river otter): 125101987
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Entry
125101987 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38-like isoform X1
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125101987
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125101987
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125101987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-Nse
U-box
XLF
Trm112p
RDM
Fib_alpha
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
125101987
NCBI-ProteinID:
XP_047588619
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All DBs
Position
6:complement(3108112..3126094)
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AA seq
477 aa
AA seq
DB search
MADGIPYWNLSGKAMASATKKVKEEATCAICLSLMSEPMSISCGHSYCSQCIVSFLENQG
PVDASSNTFPCPHCRAPFRLASLRPNKQLGSLIEAIKEMEHEMSCEEHGEHLHLFCEDES
QLICWRCERSPRHKGHHTALIEDVCQDYKEKLQNAVTNLRQLEEECMKLKLFTTKQISEW
NEKIEIEKQKIQSDFKNLQSFLQEEEKSHLWKLEKEKEQTLKRLRDNEATLEQKSQELRS
HILELEEKCQSSAQKLLQDVKDTLRRSWAMTLERPDAHSLELHAVCSVSELYFDVKKMLR
SYQVNVTLDPDTAHRELILSEDRRQVTRGCPQENLDNSSKRFSILPCILGCEGFTSGKHY
FEVDVGEGTGWDLGVCLDSVHRDIGLMQKPQSGFWAIRLCKKKGYLALTYPITSLSLAEQ
PLVVGIFLDCDVGLVSFYNMTTGSHIFTFPKASFSDTVRPYFRVYQHSPLFLPPPDE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggatcccatattggaacttgtcaggaaaagccatggcctcagccaccaag
aaggtgaaggaggaagccacgtgtgccatctgcctgtccctaatgtctgagcccatgagc
atcagctgtggacacagctactgcagtcagtgcatcgtcagcttccttgagaaccaaggc
cctgtggacgcatcgtccaatacgttcccctgcccccactgccgggctccatttcggctg
gccagcctccggcccaacaagcagctggggagtctcattgaagccatcaaggagatggag
cacgagatgtcatgtgaggagcacggagagcacctccacctgttctgcgaagacgagagc
cagctcatctgctggcgctgtgagcggtcaccgcggcacaaagggcaccacacagccctc
atcgaggacgtgtgccaggactacaaggagaagcttcagaatgctgtgacaaatttgagg
caactagaagaggagtgcatgaaactgaagttgttcacaacaaagcagataagcgaatgg
aatgagaagatagagattgagaaacaaaaaatccagtctgactttaaaaatcttcagagc
ttcctacaagaagaggagaagtctcatctctggaagctggagaaagagaaagagcagact
ctgaagagactgagagataatgaggccactctggaacagaagagccaagaactcaggagt
cacatcctggaactagaggagaaatgtcagagctccgcccagaagttgctgcaggatgtg
aaagatactttgcgcaggagttgggctatgacgttggagagaccagacgcccactctctg
gagcttcatgccgtgtgcagtgtttctgagctttattttgatgtgaagaaaatgttaagg
agctatcaagtcaatgtgactctggatccagatacagctcatcgggagctcattctgtct
gaggatcggagacaagtgacccgtggatgcccccaggagaatctggacaattcttctaag
agatttagtatcttaccctgtattttgggctgtgaaggcttcacttcaggaaaacattac
tttgaagtggatgtgggagaaggaactgggtgggacttaggagtctgtctggacagtgtt
cacagggacattggtttgatgcaaaagcctcagtctggattctgggccattagactgtgc
aaaaagaaaggctacttagcacttacctatcccataacttccctttctctggcagagcag
cctctggttgtgggtatttttctggactgtgatgtcggacttgtatccttttacaacatg
accactggatcccacatctttaccttcccaaaggcctccttctctgatactgtccggccc
tatttccgggtttatcaacattctcctttgttcctgcctcccccagatgagtaa
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