Lutra lutra (Eurasian river otter): 125102106
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Entry
125102106 CDS
T08100
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llv03016
]
125102106
Enzymes [BR:
llv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125102106
Transfer RNA biogenesis [BR:
llv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125102106
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
125102106
NCBI-ProteinID:
XP_047588779
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Position
6:complement(7124449..7832727)
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AA seq
577 aa
AA seq
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MPSASCDILLDDIEDIVSQGDLKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIP
GIQKIWLRTWGCSHNNSDGEYMAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIEELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMAQVPAQVKKQRTKDLS
RVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTEDFRKRLGTHLSSVPHTSTVRRDPAS
SRMALHLQKLRGHCALGVSVGLALFALLLALLVKVYN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcgtcctgcgacatactactggatgacatagaagatattgtgtcacaggga
gatttaaagccacaagataggcattctgcacgaaagcacgttgttccaaaggcacgaaag
cgaaacacccaaaaatatttgcaagaggaaaacagtccaccaagtgatagcaccattcca
ggcatacagaaaatttggttgcgaacatggggttgttctcataataattcagatggagaa
tatatggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgca
gatttatggctcctgaatagttgtactgtaaaaaatccagctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaacaagaagatagtgctagctggatgcgttccccaa
gcccagcctcggcaggactaccttaaaggactgagcatcataggggttcaacagatagat
cgagtggtagaagttgtggaggaaaccattaaaggtcactctgtgagactgctgggtcag
aaaaaggacaatggaaagcgcctggggggggcacgattggatttgccaaagatcaggaag
aatccgctgatagaaatcatttccatcaataccgggtgcctcaatgcttgtacctactgc
aaaactaaacacgccagaggaaatttggccagttacccaatagaagaactagtagaaaga
gccaaacagtcttttcaagagggcgtttgtgagatatggttgaccagtgaagacacgggg
gcttacggcagagacattggcaccgatctccccgcactgctgtggaaactggttgaagtg
atccctgagggagcgatgctgaggcttggcatgacaaatccaccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatccccgagtctatgctttcctgcacatcccg
gtccagtctgcctctgacactgtactcatggaaatgaagagagaatactgcgtggctgac
ttcaaaagagttgtggatttcctgaaagagaaagttcctggaataactctggccacagat
attatctgtggttttcccggagaaacagatcaagattttcaagaaacagtgaagcttgtg
gaagagtacaaatttccaagcctctttattaaccagttttacccaagacccggaactcct
gctgcgaaaatggcacaagttccagcccaagtgaaaaaacaaagaacgaaagacctttcc
cgggtgttccattcttacagtccgtatgatcacaagattggcgaaagacaacaagtgtta
gtgaccgaagagtcttttgattccaagttttacgttgcccacaatcgattctacgagcag
gtcttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttacgaa
tcaggcaaacacttcatgaaagggcagccagtatcagacgccaaagtatacacgccatcc
atcagcaaaccattagcaaagggagaagtctcaggtttaacagaggacttcagaaaaagg
cttgggactcacctcagctcagtgccccacacttccacggttcggcgggaccctgcgagt
tccagaatggcgctccacttgcaaaagctccgtggacactgtgcactgggggtgtctgta
ggcctggctctgtttgccctccttctggctcttttggtcaaagtctataattaa
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