Lutra lutra (Eurasian river otter): 125102267
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Entry
125102267 CDS
T08100
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125102267
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125102267
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125102267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-Tbcl_FmdE
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
125102267
NCBI-ProteinID:
XP_047589230
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Position
6:895407..913165
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AA seq
513 aa
AA seq
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MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLTRCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHAHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgcctg
cagtacttcgccgagcccatgatgctcgactgcggccacaacatctgttgcgcgtgcctc
acccgctgctggggcgcggcggagaccaacgtgtcgtgtccgcagtgccgggagaccttc
ccgcagcggcacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggcccgggggcgagatgggcgtgtgcgagaagcaccgc
gagccgctgaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcccgcgagcaccgcggccacagcgtgctgccgctcgaggaggcggtggagggcttcaag
gagcaaatccagaaccagctggaccacctgaaaagagtgaaggacttaaagaagaggcgt
cgggcacagggggagcaggcacgggctgaactcttgagcctgacccagatggagagggag
aagatcgtctgggagttcgagcagctctaccactccttgaaggagcacgagtaccgcctc
ctggcccggctcgaggagctggatttggccatttacaacagcatcaacggcgccatcacc
cagttctcctgcaacatctcccacctgagcggcctgattgcgcagctggaggagaagcag
cagcagcccaccagggagctcctgcaggacatcggggacacactgagcagagcggaaaga
atcaggatccctgagccctggatcacacctccagatctgcaagagaaaatccacattttt
gcgcagaaatgtctattcctgaccgagagcctgaagcagttcacagaaaaaatgcagtca
gatatggagaaaatccaagaattgagggaagctcagttatactcagtggacgtgaccctg
gacccagacacggcctaccccagcctgattctctccgataacctgcggcaagtgcggtac
agttacctccagcaggacctgcctgacaaccccgagcggttcaatctgttcccctgtgtc
ctgggctctccgtgcttcatcgctgggagacattattgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgcgaagactccgtgtgcaggaaaggcggagtcacctcg
gccccccagaacggattctgggcagtgtccttgtggtatgggaaggagtactgggctctt
acctccccgatgactgccctccccctgcggacccccctccagcgggtgggcattttcttg
gactatgatgctggcgaggtctccttctacaacgtgacagagaggtgtcacacctttact
ttctctcatgctaccttctgtgggcctgtccggccctacttcagcctgagttactcgggg
gggaagagcgcagcccccctcatcatctgccccatgagcggcatcgatggcttttctggc
cacgttggcaatcatgctcattccatggagacctccccttga
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