KEGG   Lutra lutra (Eurasian river otter): 125102282
Entry
125102282         CDS       T08100                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125102282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:llv03041]
    125102282
Spliceosome [BR:llv03041]
 Complex C
  Other components
   Step II factors
    125102282
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 125102282
NCBI-ProteinID: XP_047589268
LinkDB
Position
6:131671840..131717140
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSASTKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcagctctggctgcgtcctacggttcgggttcagggtccgaatcg
gactcggacagtgagggcggtcggtgttccctgccagctgccgactccctcatgcacttg
acgaaatcagcttcgaccaaaccctctctggcagtggcggtggactccgctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcagatggctgcccctaggaatatgctttctgggtatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacatttgccacatacggttatgcattagac
ccttcattagataaccatcaagtgtctactaaatatattggttcagtagaagaagctgaa
aaaaatcaaggtttaaccgtgtttgaaactggtcagaaaaagatagagaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaggatgtagccaaaccctcagaagaagaacaaaaagaattggatgaaattaca
gcaaagaggcagaaaaaaggcaaacaggaagaagagaaacctggggaggagaagacaatt
ctacatgttaaagaaatgtatgactaccaaggtagatcctatcttcacatacctcaggat
gttggtgttaatcttcggtcgactgtgccacctgagaagtgttaccttcccaaaaagcaa
attcatgtgtggtctggacatacgaagggcgtcagtgctgtcagattatttcctctatct
ggccatttattgctgtcttgttccatggactgtaaaatcaagctctgggaggtttatgga
gacagacgctgtctgcgaacatttattggccacagcaaagccgttagggatatctgcttt
aatactgcagggacgcagttcctcagcgcagcttacgacaggtaccttaagctctgggac
acggagacaggacagtgtatatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcccgatgaagataagcaaaatctctttgtagctggtatgtctgataaaaagatt
gtgcagtgggacattcgaagtggggaaattgttcaggagtatgaccggcacttgggggcc
gtcaacaccattgtttttgttgacgagaacaggagatttgtgagcacatctgatgataag
agcctaagagtttgggaatgggacatccctgtggatttcaagtacatagcagagcccagt
atgcactcgatgcctgcggtgactttgtctccaaacgggaaatggctagcctgccaatcg
atggacaaccaaatcttaatttttggagcacagaacagatttagattgaataagaaaaaa
atttttaagggccatatggtagcgggttatgcttgtcaggtggacttttcaccagacatg
agctatgtgatttcaggagatggcaatggaaaactgaacatctgggactggaagacgaca
aaactctacagtcgatttaaagctcatgataaagtgtgtataggggcagtgtggcaccct
catgaaacatctaaagtcataacgtgtggttgggatggtctcattaagttgtgggattaa

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