Lutra lutra (Eurasian river otter): 125102973
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Entry
125102973 CDS
T08100
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125102973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125102973
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125102973
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
125102973
NCBI-ProteinID:
XP_047590623
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All DBs
Position
6:complement(27486665..27504387)
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AA seq
451 aa
AA seq
DB search
MNLEGSGRGGEFGMSSVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISD
PYKVYRIVPEGAKKGAKQLTLEDPQMTMSHPYTMTTPYTSLPAQQVHNYMMPPHDRSWRE
YVPDQPHPEIPYQCPVTFGSRSHHWQGPACENGCQVTGTFYACAPPESQAPGIPIEPSIR
SAEALALSDCRLHICLYYREILVKELTTSSPEGCRISHGHTYDASNLDQVLFPYPEDNGQ
RKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFD
TQQFLAELQAFAHHGRPLPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN
SGHFLRGYDLPEHINSPEDYHRSIRHSSIQE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggagggcagcggccgaggaggagagttcggcatgagctcggtgagctgcggc
aatgggaaactccgccagtggctgatcgaccagatcgacagcggcaagtacccaggactg
gtgtgggagaacgaggagaagagcatcttccgcatcccctggaagcacgcgggcaagcaa
gactacaaccgcgaggaggacgccgccctcttcaaggcttgggcactatttaaaggaaag
tttcgagaaggcatagataagccagaccctcctacctggaagacacgtttgcggtgtgct
ttgaacaagagcaatgactttgaggaacttgtggagaggagccagctggacatctcagac
ccctacaaagtatacaggattgttcctgagggtgcaaaaaaaggagcaaagcagctcacc
ctggaggacccacagatgaccatgagccacccctacaccatgacgactccttatacctca
ctcccagctcagcaggttcataactacatgatgccaccccatgaccgaagctggagagaa
tatgtccctgatcagccccacccagaaatcccgtatcaatgtcctgtgacgtttggatcc
cgcagccaccactggcaaggcccggcttgtgaaaatggttgccaggtgacaggaaccttt
tatgcttgtgccccgcctgagtcccaggcccctggaatccccatagagccaagcataagg
tctgctgaagccttggcgctctcagactgtcgactccacatttgtttgtactaccgggag
atcctggtgaaagagctgaccacatctagcccagaaggctgtcggatctcccatgggcat
acctacgatgccagtaacctggaccaggtccttttcccctacccagaagacaatggccag
aggaaaaacatcgagaaacttctgagccacctggaaaggggtgtggtcctctggatggcc
cccgacggtctgtatgccaaaagactgtgccagagcaggatctactgggatgggcctctg
gcactctgcagtgaccgacccaataaactggagagggaccagacttgcaagctctttgac
acacagcagtttttagcagagttgcaagctttcgctcaccatggccgtcccctgccaaga
ttccaggtaactctgtgcttcggagaagagtttccagatcctcagaggcaaaggaagctc
atcactgctcacgtcgaacctctactagccagacaactatattattttgctcagcaaaac
agtggacatttcctgaggggctatgatttacctgaacacataaacagtccagaggattat
cacagatctattcgccactcatccattcaagaatga
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