Lutra lutra (Eurasian river otter): 125103214
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Entry
125103214 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125103214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125103214
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125103214
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125103214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125103214
NCBI-ProteinID:
XP_047591072
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All DBs
Position
6:10118351..10119785
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AA seq
395 aa
AA seq
DB search
MGAEASGSGPALQELVREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSTLRPGPAAPRAAPCAPGALTCHRAF
GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGEAAQDVRYPLDV
TVTNDCHVVVTDAGDRSIKVFDFFGQIKLVIAGQFSLPWGVETTPQNGVVVTDAEAGSLH
LLEVDFPEGVLQRTERLQVHLCSPRGVAVSWLTGAIAVLEHPLGLGSAVGSTTVKVFSPT
MQLISQVDSFGLSLFFPSRITASAVTFDHQGNVIVADTSGQAVLCLGKPEEFPVLKPIIT
HGLSHPVALTFTKENALLVLDSAAHSIKVYKADWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcgtcggggagcgggccggcgctgcaggagctcgtgcgcgaggccgag
atcagcctgctcgagtgcaaggtgtgctttgagaggttcggccaccgccagcagcggcgc
ccgcgcaacctgccctgcggccacgtggtgtgcctggcctgcgtggccgccctggcgcac
ccgcggacgctggccctcgagtgccccttctgccgccgggcctgccggggctgcgacacc
agcgactgcctgcccgtgcttcacctcctggagctcctgggctcgacgctccgcccaggc
cccgccgccccccgcgccgcgccctgcgcccccggggccctcacctgccaccgcgctttc
ggaggctgggggaccctggtcaaccccacgggcctggcgctgtgtcccaagacggggcgg
gtcgtggtggtgcacgacggcaggaggcgggtcaagatctttgactccgggggagggtgt
gctcaccagtttggagagaagggggaggcagcccaggacgttaggtacccgctcgatgtc
accgtcaccaacgactgccatgtggttgtcaccgacgccggcgaccgttctatcaaagtg
tttgatttctttggccagatcaagctcgtcattgcaggccagttctccttaccttggggc
gtggagaccacccctcagaacggggtcgtggtgactgatgcggaggcaggctcgctgcac
ctgctggaagtcgacttccccgaaggggtcctccagaggacagagaggttgcaagttcat
ctgtgcagtccccgcggggtggccgtgtcttggctcaccggggccattgctgtcctagag
caccctttgggtctggggagcgcggtgggcagcaccacggtgaaggtgttcagcccgacc
atgcagctgatcagccaggtggatagctttgggctgagcctctttttcccctccagaata
actgcctcggccgtgacctttgatcaccaggggaatgtgattgttgctgatacttctggt
caggctgtcctatgcttaggaaaacctgaggaatttccagtcctgaagcccatcatcacc
cacggtctttcccatccggtggcactgaccttcaccaaggagaatgctcttctcgtgctg
gacagtgcagcccattctataaaagtctacaaagcggactgggggtaa
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