Lutra lutra (Eurasian river otter): 125103670
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Entry
125103670 CDS
T08100
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04810
Regulation of actin cytoskeleton
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125103670
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125103670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125103670
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125103670
Factors involved in mRNA localization
Other mRNA localization factors
125103670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Motif
Other DBs
NCBI-GeneID:
125103670
NCBI-ProteinID:
XP_047591325
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All DBs
Position
7:complement(27500737..27628718)
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AA seq
1253 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQETQKTDTEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSKYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaggtgacgctggaggatgcactgtccaatgtggacctcctggaagagctg
cctttgcctgaccagcagccctgcattgagcccccaccatcctcactgctctaccagcca
aatttcaacactaactttgaagacagaaatgcatttgttactggtattgcaagatatatt
gaacaggcgactgtccattctagcatgaatgaaatgctggaggagggccaagagtacgcg
gtcatgctgtacacctggaggagctgctctcgggccatcccacaggtgaaatgtaacgag
cagcctaatagagtggaaatttatgagaaaaccgtagaggtcctggagcctgaggtcaca
aaactgatgaattttatgtacttccagagaaatgccattgagcgattctgtggggaggtg
aggcgcctgtgccatgcggagagaaggaaggacttcgtgtctgaagcctacttgatcacg
ctggggaagttcattaacatgtttgctgtgctggatgaactgaagaacatgaagtgcagc
gtgaagaacgaccactcggcttacaagagggctgctcagtttttacggaaaatggcagac
ccacagtccatccaggaatcacaaaatctgtccatgttcctggccaaccacaacaaaatc
acacaatcgttgcagcaacagcttgaagtgatttctggctatgaagagcttctcgccgat
atcgtgaatctgtgtgtggattactatgagaataggatgtacctgacacccagcgagaaa
cacatgcttctcaaagtcatggggttcggtctatacttgatggatgggagtgtcagcaac
atctataaacttgatgccaagaaaagaataaacttatccaaaatcgataagtacttcaag
cagctccaggtggttccactgttcggggacatgcaaatagaactggcaagatacatcaag
accagcgcccactatgaggaaaataaatctcgatggacgtgcacatcgtccagcagcagc
ccgcagtacaacatctgtgagcagatgatccagatccgggaggaccatatgcgcttcatc
tcagagttggcacgctacagcaacagcgaggttgtcacagggtcgggccgccaggagact
cagaagacagacactgagtaccggaagctgtttgatctggcacttcagggcctacagctg
ctgtctcagtggagtgctcatgtgatggaagtgtattcatggaaacttgtgcacccaacg
gacaagtactccaacaaggactgtcccgacaatgctgaggagtatgagcgtgccacccgc
tacaactacaccagtgaggagaagtttgccctggtggaggtgattgccatgatcaaaggt
ctgcaggtgctgatgggcaggatggagagtgtattcaaccatgccatccggcacactgtc
tatgctgcactgcaggacttttcccaggttaccctccgggaaccactcaggcaggccatt
aagaagaagaagaacgtcatccagagtgtcctgcaggccatcaggaagaccgtgtgtgac
tgggagacggggcatgagcccttcaacgacccagccctgcgaggcgagaaggaccccaag
agcggctttgacatcaaagtaccccggcgcgctgtaggaccctccagcactcagctttac
atggtgagaaccatgctagagtccctcattgcagacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaatttcatcgagagtcattc
ttctacactcatttgataaatttcagtgaaacactccagcagtgctgtgacctttcacag
ttgtggttccgagagttctttctggaactgacaatgggcaggaggatccagttccccatc
gagatgtccatgccctggatcctgacggaccacatcctggagaccaaggaggcgtcaatg
atggagtacgtcctctactccttggacctgtacaatgacagcgcacactatgccctcacc
aggttcaacaagcagtttctctacgacgaaattgaggcagaggtgaatctgtgctttgac
caatttgtttataagctggcagaccagatatttgcatattataaggttatggcaggaagt
ttgcttcttgataaacgtttacgatcagaatgcaagaatcagggggcaacaatccatctc
ccaccgtctaaccgctatgagaccctacttaagcagaggcatgtgcagctcctaggaaga
tccattgaccttaatcgcctgattactcagcgtgtctcagcagccatgtataagtctctg
gaactggctattggacgatttgaaagtgaagacttgacatcaatagttgagttggatggc
cttttggaaatcaaccgcatgacccacaagctgctaagcaagtacctgacactggacagc
tttgatgccatgttccgggaggccaaccacaatgtgtccgcgccctatgggagaatcacc
ctccatgtcttctgggagctcaactatgacttcctgcccaactactgctacaatggctcc
accaaccgatttgttcggacagtattaccattttctcaagaatttcaaagagataaacag
cctaatgcacaaccccagtatttgcatggatcaaaagctttgaacttggcgtactctagc
atttatggcagctaccggaacttcgtggggcctcctcacttccaggtcatctgccggctg
cttggctaccagggcattgccgtggtcatggaggagctactgaaggtcgtgaagagcctg
ctgcaaggcacaatcctgcagtacgtgaagacactgatggaggtgatgcccaagatctgc
cgcctgccccggcatgagtatggctctcctggcatcctagagttcttccaccaccagctg
aaggacattgttgagtatgcggagctgaagacagtgtgcttccaaaacctgcgggaagtg
ggcaatgctgtcctcttctgcctgctcatcgagcaaagcctgtctttagaagaagtgtgt
gacctcttgcacgcagccccatttcagaacatcctgccgagagtccacgtgaaagaggga
gagagacttgatgccaaaatgaaaagactggaatcaaagtatgcaccactgcatcttgtc
cctctgattgaaagactggggacccctcagcaaattgcaatagcaagagagggggacttg
ctgacaaaggagcgtctctgctgtggcctgtctatgtttgaagtcatcctgactcggatc
cggacctttctggatgaccccatctggcgtgggcctctgcccagcaatggagtcatgcat
gtggatgagtgcgttgagtttcacagactctggagtgccatgcaatttgtctattgtatt
cctgtgggaacccacgagtttacagtcgagcagtgctttggcgacgggctccactgggct
ggctgtatgatcattgtacttcttgggcaacagcggcgctttgctgtcctggatttctgc
taccatctacttaaagtccagaaacatgatggcaaagatgagattataaaaaatgtgcca
ttaaagaagatggtagagagaattcgcaagttccagattctaaatgatgaaataattact
atcttggacaagtacttgaagtctggtgatggagaaagcacacccgtggagcatgttcgc
tgctttcagccacctatccaccagtccctcgccagcagctga
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