KEGG   Lutra lutra (Eurasian river otter): 125103942
Entry
125103942         CDS       T08100                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125103942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125103942
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     125103942
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR19_1st eIF2A WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Ge1_WD40 Cytochrom_D1 PROPPIN Beta-prop_WDR75_2nd Beta-prop_DCAF12 WD_LRWD1 VPS8_N WDR54 Beta-prop_RIG_1st Beta-prop_VPS8 WD40_like GSDH Beta-prop_IFT122_2nd DUF2415 Nucleoporin_N
Other DBs
NCBI-GeneID: 125103942
NCBI-ProteinID: XP_047591985
LinkDB
Position
7:330042..346926
AA seq 305 aa
MTNQYSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWSDERLDLQWSL
EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY
LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHASLAGTLSGHASWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHV
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccaaccagtacagtattctcttcaagcaagagcaagcccatgatgatgccatttgg
tcagtcgcctgggggacaaacaagaaagaaaactctgagacagtggtcacaggatccctg
gatgacctggtgaaggtctggaaatggtctgatgagaggctggacctgcagtggagcctg
gagggacaccagctgggtgtggtgtctgtggacatcagccacacgctgcccattgccgca
tccagttcgctcgatgctcacatccgcctctgggacttggagaacggcaaacagataaag
tctatagatgcaggacctgtggatgcctggactttggccttttctcctgattcccagtat
ctggccacaggaactcatgtggggaaagtgaacatttttggtgtggaaagtggaaaaaag
gaatattctttggacacaagaggaaaattcattcttagtattgcatatagcccagatggg
aagtacctggccagtggagccattgacgggatcatcaacatttttgatattgcaactgga
aagctcctgcacacgctggaaggccacgctatgcccatccgctccctgaccttctccccg
gactcccagctccttgtcactgcttcagatgacggctacatcaagatctatgacgtacaa
catgccagtctggccggcacactgagcggccacgcgtcgtgggtgctgaacgttgccttt
tgtcccgatgacacacacttcgtttccagttcatccgacaaaagtgtgaaagtttgggac
gttggaacgagaacgtgtgtgcacaccttcttcgaccaccaggatcaggtctggggagta
aaatacaacggaaatggctcaaaaattgtgtccgtgggcgatgaccaggaaatccatgtc
tacgattgccctgtgtaa

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