Lutra lutra (Eurasian river otter): 125103957
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Entry
125103957 CDS
T08100
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125103957
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125103957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
ANAPC5
Motif
Other DBs
NCBI-GeneID:
125103957
NCBI-ProteinID:
XP_047592011
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All DBs
Position
7:93882793..93921507
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AA seq
667 aa
AA seq
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MQNSHMDEYRNSSNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNAAAEENEV
TNAVDLPVTETEANFPPEYEKFWKTVESNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNARSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDRAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKVHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtagaacagtctgctgatttcagtactgagattatgaatgtgacggaa
atggaacagtcccctgatggatctcctaatgtgaatgcagctgcagaagaaaatgaagta
acaaatgctgtggaccttccagtgacagaaacagaagcaaatttccctccagagtatgaa
aaattctggaaaactgtagaaagcaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccatattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacaatcagatgaggtatatcgacgggggcttcaggcaatacctcttagt
gttgatctatggatacattatataaacttcttaaaagaaacattggaccctggtgatcct
gagacaaacagtacaataagaggaactttcgagcacgctgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacagggtaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcac
cattttcagagatttaaagaacatgtacagaataacttgcctagagatctgttaactggc
gaacagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggtgatgat
ggtcctcctggtgatgatctaccgtcaggaattgaagacattaccgatccagcaaagctg
attacagaaatagaaaacatgagacatagaatcattgaaattcatcaagagatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactaaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtacatatgctttgggcagcttttgaggaacagcagggtaatattaacgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagagcgacggcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccagatcaaataatgaatcatcgttttatgctatcaaactagctcggcatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacagagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctcaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagttcacaca
gaagatacaacttcatcatctacgcagatgattgatggtgatttacaggcaaatcaagct
gcgtataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctccccctccaacctga
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