Lutra lutra (Eurasian river otter): 125104040
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Entry
125104040 CDS
T08100
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05200
Pathways in cancer
llv05202
Transcriptional misregulation in cancer
llv05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125104040
05202 Transcriptional misregulation in cancer
125104040
09162 Cancer: specific types
05211 Renal cell carcinoma
125104040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125104040
Transcription factors [BR:
llv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125104040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_11
PAS_3
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
Diguanyl_cycl_sensor
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
125104040
NCBI-ProteinID:
XP_047592183
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Position
7:1500744..1646017
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AA seq
717 aa
AA seq
DB search
MATPAAVNPPEMASDIPGSVTLPVAPMAATGPVRMAGAMPARGGKRRSGMDFDDEDGEGP
SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTG
NKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG
STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR
MRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEED
AEVGQGSKYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGY
QPQDLLGKDILEFCHSEDQSHLRESFQQVVKLKGQVLSVMYRLRTKTREWMLIRTSSFTF
QNPYSDEMEYVICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAGVHETGKSV
EKADAIFSQERDPRFAEMFAGISASDKKMMSSAPAAGTQQIYSQGSPFPPGHSGKAFSSS
VVHVPGVNDIQSSSSTGQNMSQISRQLNQSQVAWTGSRPPFPGQQIPSQSGKTQSSPFGI
GTSHTYPADPSSYSPLSSPATSSPSGNAYSSLANRTPGFAESGQSSGQFQGRPSEVWSQW
QSQHHGQQSGEQHPHQQPGQTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMFPPFSE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccggcggcggtcaaccctccggaaatggcttctgacatccctggatcggtg
acattgcctgtggcccccatggcggccaccggacccgtgaggatggccggggccatgccc
gcccgtggaggaaagcggcgttctgggatggactttgacgatgaagatggagaagggccc
agcaaattttcaagagagaaccacagcgagatcgagaggcggcggcggaacaagatgaca
cagtacatcacggagctgtcggacatggtgcccacgtgcagcgcgctggcccgcaagccc
gacaagctcaccatcctccgcatggccgtgtcgcacatgaagtccatgaggggcaccggc
aacaagtccacggacggcgcctacaagccctccttcctgacggagcaggaactgaagcac
ctcatcctggaagcagcagacggctttctatttgtggtggcggcagagaccggacgtgtg
atttacgtgtctgattccgtcacccctgtgctgaaccagccccagtcagaatggtttggg
agcacactgtacgaacaggtgcatcctgatgacgtggagaagctcagagagcagctgtgc
acctcagaaaactccatgacaggcaggatcctggacctgaagacagggacggtcaagaag
gagggacagcagtcttccatgaggatgtgcatgggctcacggaggtctttcatctgcagg
atgaggtgtggaaacgctcctctggaccacctccctctgaacagaataaccaccatgaga
aaaaggttcaggaacggccttggtcccgtgaaagaaggggaggcccagtatgctgtggtc
cactgcacggggtacatcaaggcgtggcccccggcaggaatgactatccccgaggaggat
gccgaggtggggcagggcagcaagtactgcctcgtggccattggaagactccaggtgacc
agctctcccgtgtgcatggacatgagtgggatgtcagtgcccacggagttcttatcccgg
cataactctgatgggatcatcacgttcgtggaccccagatgcatcagcgtgattggctac
caaccccaggatcttctagggaaggacattctggaattctgccactccgaggaccagagc
cacctgcgcgagagctttcagcaggtggtgaagctcaaggggcaggtgctgtcggtcatg
taccggctgcggaccaagacgcgcgagtggatgctgatccgcaccagcagcttcacgttc
cagaacccctactccgacgagatggagtacgtcatctgcaccaacaccaacgtcaagcag
ctccagcagcagcaagcggagttggaagtgcaccagcgggacgggctgtcgtcctacgac
ttatcacaggttcccgtccccaacctgccggctggcgttcacgaaaccgggaagtccgtg
gagaaggcggatgccatcttctcccaggaaagggacccccggttcgctgagatgtttgca
gggatcagtgcatcggacaagaagatgatgagctcagcgcccgcggccgggacgcagcag
atctactcccagggcagcccgttccccccggggcactccgggaaggccttcagctcttcc
gtggtccatgtgcccggcgtgaatgacatccagtcctcctcgtcgaccggccagaacatg
tcccagatctcccgccaactgaaccagagtcaggtggcctggacagggagccggccgccc
tttcccggacagcaaatcccttcccagtccggcaagactcagtcatctccctttgggatt
ggcacgagccacacctacccggcggacccgtcctcctacagccccctctccagcccagct
acctcctcgcccagcgggaacgcctactccagtctcgccaaccggacgccagggtttgcc
gagagtggacagagtagcgggcagttccaagggcggccgtcggaagtctggtcgcagtgg
caaagccagcaccacggtcagcagagcggtgagcagcatccccaccagcagcccggtcag
accgaagtgttccaggacatgctacccatgcccggagatccgacccaggggaccggcaac
tataacatcgaagacttcgcggacctgggcatgttcccgccgttttctgagtag
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